Experiment ID: 368

Field Description
namegut microbiota in human sle and a mouse model of lupus
srasrp092445
datamd52d833a12118aa49e88baeb3bea3c0792
mapmd52d3c7250bafd5226c9592ecb17fcb06a

Annotations for experiment:

Fraction of dbbact annotations with this term covered by the query
TermScore
latetimepoints0.500000
age 23-33 weeks0.500000
LOWER IN 10-18 weeks0.500000
nzb/w f10.500000
dexamethasone0.500000
age 10-18 weeks0.500000
LOWER IN 23-33 weeks0.500000
LOWER IN dexamethasone0.500000
systemic lupus erythematosus0.250000
LOWER IN systemic lupus erythematosus0.250000
commonwealth of virginia0.166667
LOWER IN early timepoints0.142857
early timepoints0.111111
LOWER IN late timepoints0.111111
mouse0.015152
mus musculus0.013699
research facility0.005348
LOWER IN control0.004762
control0.004651
adult0.004292
united states of america0.003390
homo sapiens0.002747
feces0.002375
Fraction of annotations for the query sequences containing the term
TermScore
feces1.000000
united states of america1.000000
research facility0.500000
mus musculus0.500000
mouse0.500000
nzb/w f10.500000
homo sapiens0.500000
adult0.500000
commonwealth of virginia0.500000
systemic lupus erythematosus0.416667
control0.333333
LOWER IN systemic lupus erythematosus0.250000
LOWER IN control0.166667
latetimepoints0.083333
age 23-33 weeks0.083333
LOWER IN early timepoints0.083333
LOWER IN 10-18 weeks0.083333
dexamethasone0.083333
early timepoints0.083333
age 10-18 weeks0.083333
LOWER IN late timepoints0.083333
LOWER IN 23-33 weeks0.083333
LOWER IN dexamethasone0.083333
Number of experiments associating the term to the sequence
TermScore
latetimepoints1.000000
age 23-33 weeks1.000000
systemic lupus erythematosus1.000000
LOWER IN control1.000000
LOWER IN early timepoints1.000000
LOWER IN 10-18 weeks1.000000
feces1.000000
united states of america1.000000
research facility1.000000
mus musculus1.000000
mouse1.000000
nzb/w f11.000000
dexamethasone1.000000
LOWER IN systemic lupus erythematosus1.000000
control1.000000
early timepoints1.000000
age 10-18 weeks1.000000
LOWER IN late timepoints1.000000
LOWER IN 23-33 weeks1.000000
homo sapiens1.000000
adult1.000000
commonwealth of virginia1.000000
LOWER IN dexamethasone1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
368amnondominant feces, homo sapiens, united states of america, adult, commonwealth of virginia, systemic lupus erythematosus2018-09-03v41 / 17approvedNo
368amnon high in systemic lupus erythematosus compared to control in feces homo sapiens united states of america adult commonwealth of virginia 2018-09-03v41 / 17approvedNo
368amnondominant feces, homo sapiens, control, united states of america, adult, commonwealth of virginia2018-09-03v41 / 18approvedNo
368amnondominant feces, united states of america, research facility, mus musculus, mouse, nzb/w f12018-09-03v41 / 20approvedNo
368amnon high in control compared to systemic lupus erythematosus in feces homo sapiens united states of america adult commonwealth of virginia 2018-09-03v41 / 39approvedNo
368amnonlower in sle model mice treated with dexamethasone (reduced symptoms) ( high in systemic lupus erythematosus compared to dexamethasone in feces united states of america research facility mus musculus mouse nzb/w f1 )2018-09-03v41 / 51approvedNo
368amnoncommon feces, homo sapiens, united states of america, adult, commonwealth of virginia, systemic lupus erythematosus2018-09-03v41 / 56approvedNo
368amnoncommon feces, homo sapiens, control, united states of america, adult, commonwealth of virginia2018-09-03v41 / 82approvedNo
368amnonlower in nzb/w f1 mice late timepoints (SLE model) compared to early timepoints ( high in control early timepoints age 10-18 weeks compared to late timepoints 23-33 weeks systemic lupus erythematosus in feces united states of america research facility mus musculus mouse nzb/w f1 )2018-09-03v41 / 132approvedNo
368amnoncommon feces, united states of america, research facility, mus musculus, mouse, nzb/w f12018-09-03v41 / 161approvedNo
368amnonhigher in sle model mice treated with dexamethasone (reduced symptoms) ( high in dexamethasone compared to systemic lupus erythematosus in feces united states of america research facility mus musculus mouse nzb/w f1 )2018-09-04v41 / 257approvedNo
368amnonhigher in nzb/w f1 mice late timepoints (SLE model) compared to early timepoints ( high in latetimepoints age 23-33 weeks systemic lupus erythematosus compared to control early timepoints 10-18 weeks in feces united states of america research facility mus musculus mouse nzb/w f1 )2018-09-03v41 / 265approvedNo

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