Experiment ID: 371

Field Description
namechanges in the gut microbiota of urban subjects during an immersion in the traditional diet and lifestyle of a rainforest village
sraerp110254
qiita11874
datamd579fa547ca866379fdb8575136fe033cc
mapmd5b9a4450f43e7e96edcb537032ebe3032

Annotations for experiment:

term enrichment score
TermScore
venezuela0.472727
amerindian0.472727
hunter gatherer0.276596
LOWER IN venezuela0.272727
LOWER IN amerindian0.272727
LOWER IN hunter gatherer0.240000
LOWER IN obsolete_juvenile stage0.181818
LOWER IN city0.130435
LOWER IN united states of america0.115385
obsolete_juvenile stage0.111111
LOWER IN infant0.095238
city0.068182
LOWER IN adult0.060606
infant0.046512
skin0.044444
saliva0.031915
adult0.008368
united states of america0.006726
homo sapiens0.005525
feces0.004732
Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN venezuela0.500000
LOWER IN amerindian0.500000
venezuela0.333333
amerindian0.333333
LOWER IN hunter gatherer0.333333
LOWER IN obsolete_juvenile stage0.333333
hunter gatherer0.166667
LOWER IN city0.100000
obsolete_juvenile stage0.100000
LOWER IN united states of america0.083333
LOWER IN infant0.076923
city0.041667
LOWER IN adult0.040000
infant0.028571
skin0.024390
saliva0.016667
adult0.004329
united states of america0.003425
homo sapiens0.002770
feces0.002381
Fraction of annotations for the query sequences containing the term
TermScore
homo sapiens1.000000
venezuela0.812500
amerindian0.812500
hunter gatherer0.812500
feces0.375000
saliva0.375000
skin0.250000
LOWER IN united states of america0.187500
LOWER IN city0.187500
united states of america0.187500
city0.187500
LOWER IN venezuela0.187500
LOWER IN amerindian0.187500
LOWER IN hunter gatherer0.187500
adult0.125000
LOWER IN infant0.125000
LOWER IN obsolete_juvenile stage0.125000
infant0.125000
obsolete_juvenile stage0.125000
LOWER IN adult0.125000
Number of experiments associating the term to the sequence
TermScore
venezuela1.000000
amerindian1.000000
hunter gatherer1.000000
LOWER IN united states of america1.000000
LOWER IN city1.000000
homo sapiens1.000000
skin1.000000
feces1.000000
united states of america1.000000
city1.000000
LOWER IN venezuela1.000000
LOWER IN amerindian1.000000
LOWER IN hunter gatherer1.000000
saliva1.000000
adult1.000000
LOWER IN infant1.000000
LOWER IN obsolete_juvenile stage1.000000
infant1.000000
obsolete_juvenile stage1.000000
LOWER IN adult1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
371amnondominant feces, homo sapiens, venezuela, amerindian, hunter gatherer2018-09-06v41 / 11approvedNo
371amnondominant homo sapiens, skin, venezuela, amerindian, hunter gatherer2018-09-06v41 / 14approvedNo
371amnondominant homo sapiens, saliva, venezuela, amerindian, hunter gatherer2018-09-06v41 / 15approvedNo
371amnonNEGATIVELY correlated with age in amerindians ( high in infant obsolete_juvenile stage compared to adult in feces homo sapiens venezuela amerindian hunter gatherer )2018-09-06v41 / 15approvedNo
371amnonnegatively correlated with age in amerindian saliva ( high in infant obsolete_juvenile stage compared to adult in homo sapiens saliva venezuela amerindian hunter gatherer )2018-09-06v41 / 16approvedNo
371amnonpositively correlated with age in amerindian saliva ( high in adult compared to infant obsolete_juvenile stage in homo sapiens saliva venezuela amerindian hunter gatherer )2018-09-06v41 / 17approvedNo
371amnonhigher in saliva of amerindians compared to western visitors ( high in venezuela amerindian hunter gatherer compared to united states of america city in homo sapiens saliva )2018-09-06v41 / 24approvedNo
371amnonpositively correlated with age in amerindians ( high in adult compared to infant obsolete_juvenile stage in feces homo sapiens venezuela amerindian hunter gatherer )2018-09-06v41 / 27approvedNo
371amnoncommon homo sapiens, saliva, venezuela, amerindian, hunter gatherer2018-09-06v41 / 43approvedNo
371amnonlower in saliva of amerindians compared to western visitors ( high in united states of america city compared to venezuela amerindian hunter gatherer in homo sapiens saliva )2018-09-06v41 / 60approvedNo
371amnoncommon feces, homo sapiens, venezuela, amerindian, hunter gatherer2018-09-06v41 / 121approvedNo
371amnoncommon homo sapiens, skin, venezuela, amerindian, hunter gatherer2018-09-06v41 / 195approvedNo
371amnonlower in skin of amerindians compared to western visitors ( high in united states of america city compared to venezuela amerindian hunter gatherer in homo sapiens skin )2018-09-06v41 / 195approvedNo
371amnonlower in amerindians compared to western visitors ( high in united states of america city compared to venezuela amerindian hunter gatherer in feces homo sapiens )2018-09-06v41 / 417approvedNo
371amnonhigher in amerindians compared to western visitors ( high in venezuela amerindian hunter gatherer compared to united states of america city in feces homo sapiens )2018-09-06v41 / 443approvedNo
371amnonhigher in skin of amerindians compared to western visitors ( high in venezuela amerindian hunter gatherer compared to united states of america city in homo sapiens skin )2018-09-06v41 / 854approvedNo

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