Experiment ID: 384

Field Description
namelung microbiome is influenced by the environment and asthmatic status in an equine model of asthma
sraprjna361129
datamd5cd1c3e9f464bd8427203de5bb5d0eb49
mapmd5820751cade1bb170934aac508c58283e

Annotations for experiment:

term enrichment score
TermScore
barn0.500000
hay0.400000
pasture0.352941
LOWER IN barn0.200000
LOWER IN pasture0.200000
horse0.181818
LOWER IN hay0.181818
equus caballus0.166667
nasal cavity0.122807
pair of nares0.122807
LOWER IN asthma0.111111
asthma0.111111
LOWER IN nasal cavity0.105263
LOWER IN oral cavity0.090909
LOWER IN pair of nares0.090909
oral cavity0.089744
LOWER IN mouth0.086957
mouth0.074689
canada0.062500
LOWER IN saliva0.057143
farm0.046512
saliva0.032907
LOWER IN control0.008850
control0.008658
Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN barn0.500000
barn0.500000
LOWER IN pasture0.500000
LOWER IN asthma0.500000
asthma0.500000
LOWER IN nasal cavity0.333333
pasture0.333333
LOWER IN hay0.333333
hay0.333333
LOWER IN oral cavity0.166667
LOWER IN pair of nares0.166667
LOWER IN mouth0.142857
horse0.100000
equus caballus0.090909
nasal cavity0.071429
pair of nares0.071429
LOWER IN saliva0.052632
oral cavity0.050000
mouth0.040000
canada0.032258
farm0.023810
saliva0.016949
LOWER IN control0.004762
control0.004651
Fraction of annotations for the query sequences containing the term
TermScore
farm1.000000
equus caballus1.000000
canada1.000000
horse1.000000
saliva0.562500
mouth0.562500
hay0.500000
barn0.500000
nasal cavity0.437500
pair of nares0.437500
oral cavity0.437500
pasture0.375000
LOWER IN hay0.125000
LOWER IN barn0.125000
LOWER IN pasture0.125000
LOWER IN saliva0.062500
LOWER IN oral cavity0.062500
LOWER IN mouth0.062500
LOWER IN nasal cavity0.062500
LOWER IN pair of nares0.062500
control0.062500
LOWER IN asthma0.062500
asthma0.062500
LOWER IN control0.062500
Number of experiments associating the term to the sequence
TermScore
nasal cavity1.000000
pair of nares1.000000
LOWER IN saliva1.000000
LOWER IN oral cavity1.000000
LOWER IN mouth1.000000
farm1.000000
equus caballus1.000000
canada1.000000
horse1.000000
saliva1.000000
oral cavity1.000000
mouth1.000000
LOWER IN nasal cavity1.000000
LOWER IN pair of nares1.000000
pasture1.000000
LOWER IN hay1.000000
LOWER IN barn1.000000
hay1.000000
barn1.000000
LOWER IN pasture1.000000
control1.000000
LOWER IN asthma1.000000
asthma1.000000
LOWER IN control1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
384amnon high in asthma compared to control in farm hay saliva oral cavity equus caballus canada horse barn mouth 2018-10-23v41 / 1approvedNo
384amnon high in control compared to asthma in farm hay saliva oral cavity equus caballus canada horse barn mouth 2018-10-23v41 / 6approvedNo
384amnondominant farm, hay, nasal cavity, pair of nares, equus caballus, canada, horse, barn2018-10-22v41 / 11approvedNo
384amnondominant farm, pasture, nasal cavity, pair of nares, equus caballus, canada, horse2018-10-22v41 / 14approvedNo
384amnondominant farm, hay, saliva, oral cavity, equus caballus, canada, horse, barn, mouth2018-10-22v41 / 15approvedNo
384amnondominant farm, pasture, saliva, oral cavity, equus caballus, canada, horse, mouth2018-10-22v41 / 18approvedNo
384amnoncommon farm, hay, nasal cavity, pair of nares, equus caballus, canada, horse, barn2018-10-22v41 / 131approvedNo
384amnon high in hay barn compared to pasture in farm nasal cavity pair of nares equus caballus canada horse 2018-10-22v41 / 161approvedNo
384amnoncommon farm, pasture, nasal cavity, pair of nares, equus caballus, canada, horse2018-10-22v41 / 175approvedNo
384amnoncommon farm, pasture, saliva, oral cavity, equus caballus, canada, horse, mouth2018-10-22v41 / 201approvedNo
384amnon high in pasture compared to hay barn in farm saliva equus caballus canada horse mouth 2018-10-22v41 / 245approvedNo
384amnoncommon farm, hay, saliva, oral cavity, equus caballus, canada, horse, barn, mouth2018-10-22v41 / 274approvedNo
384amnon high in hay barn compared to pasture in farm saliva equus caballus canada horse mouth 2018-10-22v41 / 283approvedNo
384amnon high in pasture compared to hay barn in farm nasal cavity pair of nares equus caballus canada horse 2018-10-22v41 / 304approvedNo
384amnon high in saliva oral cavity mouth compared to nasal cavity pair of nares in farm equus caballus canada horse 2018-10-22v41 / 604approvedNo
384amnon high in nasal cavity pair of nares compared to saliva oral cavity mouth in farm equus caballus canada horse 2018-10-22v41 / 791approvedNo

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