dbBact

Experiment ID: 396

Field	Description
name	host selectively contributes to shaping intestinal microbiota of carnivorous and omnivorous fish
sra	prjeb18770
datamd5	c93503518d074b24bf8034d3cce1b6df
mapmd5	42caa59642ec3b68d4a53f6d77400667

Annotations for experiment:

term enrichment score

Term	Score
cyprinus carpio	0.500000
common carp	0.500000
england	0.500000
oncorhynchus mykiss	0.333333
rainbow trout	0.333333
LOWER IN oncorhynchus mykiss	0.250000
LOWER IN rainbow trout	0.250000
LOWER IN cyprinus carpio	0.250000
LOWER IN common carp	0.250000
fish	0.117647
digestive system	0.062500
intestine	0.062500

Fraction of dbbact annotations with this term covered by the query

Term	Score
cyprinus carpio	0.500000
common carp	0.500000
LOWER IN oncorhynchus mykiss	0.500000
LOWER IN rainbow trout	0.500000
LOWER IN cyprinus carpio	0.500000
LOWER IN common carp	0.500000
england	0.333333
oncorhynchus mykiss	0.250000
rainbow trout	0.250000
fish	0.062500
digestive system	0.032258
intestine	0.032258

Fraction of annotations for the query sequences containing the term

Term	Score
digestive system	1.000000
intestine	1.000000
england	1.000000
fish	1.000000
cyprinus carpio	0.500000
common carp	0.500000
oncorhynchus mykiss	0.500000
rainbow trout	0.500000
LOWER IN oncorhynchus mykiss	0.166667
LOWER IN rainbow trout	0.166667
LOWER IN cyprinus carpio	0.166667
LOWER IN common carp	0.166667

Number of experiments associating the term to the sequence

Term	Score
cyprinus carpio	1.000000
common carp	1.000000
LOWER IN oncorhynchus mykiss	1.000000
LOWER IN rainbow trout	1.000000
digestive system	1.000000
intestine	1.000000
england	1.000000
fish	1.000000
oncorhynchus mykiss	1.000000
rainbow trout	1.000000
LOWER IN cyprinus carpio	1.000000
LOWER IN common carp	1.000000

Exp. ID	User ID	Description	Date	Region	Sequences	Status	Flag
396	amnon	dominant digestive system, intestine, cyprinus carpio, england, fish, common carp	2018-11-14	v4	1 / 10	approved	No
396	amnon	dominant digestive system, intestine, oncorhynchus mykiss, england, fish, rainbow trout	2018-11-14	v4	1 / 12	approved	No
396	amnon	common digestive system, intestine, oncorhynchus mykiss, england, fish, rainbow trout	2018-11-14	v4	1 / 21	approved	No
396	amnon	common digestive system, intestine, cyprinus carpio, england, fish, common carp	2018-11-14	v4	1 / 45	approved	No
396	amnon	high in oncorhynchus mykiss rainbow trout compared to cyprinus carpio common carp in digestive system intestine england fish	2018-11-14	v4	1 / 142	approved	No
396	amnon	high in cyprinus carpio common carp compared to oncorhynchus mykiss rainbow trout in digestive system intestine england fish	2018-11-14	v4	1 / 184	approved	No

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