dbBact

Experiment ID: 40

Field	Description
name	using community analysis to explore bacterial indicators for disease suppression of tobacco bacterial wilt
sra	srp066888
sra	prjna275515
datamd5	e1e8f10a192f7f6b6e798318f18b4750
mapmd5	b3b4703ddc0fb134db3bdb6bb6d4e1ca

Annotations for experiment:

term enrichment score

Term	Score
field soil	0.666667
nicotiana tabacum	0.500000
LOWER IN disease	0.222222
disease	0.181818
rhizosphere	0.038462
soil	0.019417
china	0.009524
LOWER IN control	0.009132
control	0.008929

Fraction of dbbact annotations with this term covered by the query

Term	Score
field soil	0.500000
nicotiana tabacum	0.333333
LOWER IN disease	0.166667
disease	0.125000
rhizosphere	0.019608
soil	0.009804
china	0.004785
LOWER IN control	0.004630
control	0.004525

Fraction of annotations for the query sequences containing the term

Term	Score
soil	1.000000
field soil	1.000000
rhizosphere	1.000000
nicotiana tabacum	1.000000
china	1.000000
control	0.333333
LOWER IN disease	0.333333
disease	0.333333
LOWER IN control	0.333333

Number of experiments associating the term to the sequence

Term	Score
soil	1.000000
field soil	1.000000
rhizosphere	1.000000
nicotiana tabacum	1.000000
china	1.000000
control	1.000000
LOWER IN disease	1.000000
disease	1.000000
LOWER IN control	1.000000

Exp. ID	User ID	Description	Date	Region	Sequences	Status	Flag
40	amnon	higher in soil susceptible to tobacco bacterial wilt disease ( high in disease compared to control in soil field soil rhizosphere nicotiana tabacum china )	2016-12-09	v4	1 / 3	approved	No
40	amnon	higher in soil protective from tobacco bacterial wilt disease ( high in control compared to disease in soil field soil rhizosphere nicotiana tabacum china )	2016-12-09	v4	1 / 9	approved	No
40	amnon	common soil, field soil, rhizosphere, nicotiana tabacum, china	2016-12-09	v4	1 / 1420	approved	No

Problems / suggestions? Please visit the dbBact forum