Experiment ID: 400

Field Description
nameus immigration westernizes the human gut microbiome
sraprjeb28687
datamd540c0ce1b6815815e744fc170d8a379b8
mapmd5e8215641b4960b1727ffde73a840e12c

Annotations for experiment:

term enrichment score
TermScore
hmong0.363636
myanmar0.300000
karen0.300000
LOWER IN hmong0.222222
thailand0.159292
LOWER IN myanmar0.125000
LOWER IN karen0.125000
LOWER IN hmong 2nd generation0.125000
hmong 2nd generation0.125000
LOWER IN thailand0.117647
LOWER IN china0.111111
LOWER IN united states of america0.105263
rural community0.092308
LOWER IN rural community0.090909
low bmi0.086957
LOWER IN low bmi0.086957
LOWER IN high bmi0.083333
high bmi0.071429
female0.025210
china0.009494
adult0.008593
united states of america0.006768
homo sapiens0.005525
feces0.004751
Fraction of dbbact annotations with this term covered by the query
TermScore
myanmar0.500000
karen0.500000
LOWER IN hmong0.500000
hmong0.500000
LOWER IN myanmar0.500000
LOWER IN karen0.500000
LOWER IN hmong 2nd generation0.500000
hmong 2nd generation0.500000
LOWER IN thailand0.333333
LOWER IN china0.250000
LOWER IN rural community0.125000
low bmi0.111111
LOWER IN low bmi0.111111
LOWER IN high bmi0.100000
thailand0.090909
LOWER IN united states of america0.083333
high bmi0.071429
rural community0.058824
female0.012987
china0.004854
adult0.004329
united states of america0.003425
homo sapiens0.002770
feces0.002381
Fraction of annotations for the query sequences containing the term
TermScore
feces1.000000
homo sapiens1.000000
thailand0.642857
adult0.571429
female0.428571
united states of america0.285714
hmong0.285714
rural community0.214286
myanmar0.214286
karen0.214286
china0.214286
LOWER IN united states of america0.142857
LOWER IN hmong0.142857
LOWER IN thailand0.071429
LOWER IN rural community0.071429
LOWER IN china0.071429
LOWER IN myanmar0.071429
LOWER IN karen0.071429
low bmi0.071429
LOWER IN high bmi0.071429
LOWER IN hmong 2nd generation0.071429
hmong 2nd generation0.071429
high bmi0.071429
LOWER IN low bmi0.071429
Number of experiments associating the term to the sequence
TermScore
thailand1.000000
rural community1.000000
LOWER IN united states of america1.000000
feces1.000000
homo sapiens1.000000
united states of america1.000000
LOWER IN thailand1.000000
LOWER IN rural community1.000000
myanmar1.000000
karen1.000000
LOWER IN hmong1.000000
LOWER IN china1.000000
hmong1.000000
china1.000000
LOWER IN myanmar1.000000
LOWER IN karen1.000000
female1.000000
adult1.000000
low bmi1.000000
LOWER IN high bmi1.000000
LOWER IN hmong 2nd generation1.000000
hmong 2nd generation1.000000
high bmi1.000000
LOWER IN low bmi1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
400amnonpositively correlated with bmi ( high in high bmi compared to low bmi in feces homo sapiens adult thailand )2018-11-18v41 / 6approvedNo
400amnonhigh freq. in hmong (chinese) females from thailand (dominant feces, homo sapiens, female, adult, thailand, hmong, china)2018-11-18v41 / 13approvedNo
400amnonhigh freq. in karen (burma) females from thailand (dominant feces, homo sapiens, female, adult, myanmar, thailand, karen)2018-11-18v41 / 14approvedNo
400amnonhigh freq. in feces of european american females (dominant feces, homo sapiens, united states of america, female, adult)2018-11-18v41 / 17approvedNo
400amnonhigher in children of hmong migrands born in the usa compared to non-migrant usa people ( high in hmong hmong 2nd generation compared to united states of america in feces homo sapiens )2018-11-18v41 / 41approvedNo
400amnonlower in children of hmong migrands born in the usa compared to non-migrant usa people ( high in united states of america compared to hmong hmong 2nd generation in feces homo sapiens )2018-11-18v41 / 52approvedNo
400amnonnegatively correlated with bmi ( high in low bmi compared to high bmi in feces homo sapiens adult thailand )2018-11-18v41 / 70approvedNo
400amnoncommon in feces of european american females (common feces, homo sapiens, united states of america, female, adult)2018-11-18v41 / 95approvedNo
400amnoncommon in hmong (chinese) females from thailand (common feces, homo sapiens, female, adult, thailand, hmong, china)2018-11-18v41 / 95approvedNo
400amnoncommon in karen (burma) females from thailand (common feces, homo sapiens, female, adult, myanmar, thailand, karen)2018-11-18v41 / 132approvedNo
400amnonhigher in hmong ethnic group (from china) compared to karen ethnic group (from burma) ( high in hmong china compared to myanmar karen in feces homo sapiens thailand rural community )2018-11-18v41 / 135approvedNo
400amnonlower in hmong ethnic group (from china) compared to karen ethnic group (from burma) ( high in myanmar karen compared to hmong china in feces homo sapiens thailand rural community )2018-11-18v41 / 329approvedNo
400amnonlower in people from thailand compared to 2nd generation immigrants to usa ( high in united states of america compared to thailand rural community in feces homo sapiens )2018-11-18v41 / 343approvedNo
400amnonhigher in people from thailand compared to 2nd generation immigrants to usa ( high in thailand rural community compared to united states of america in feces homo sapiens )2018-11-18v41 / 378approvedNo

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