Experiment ID: 400

Field Description
nameus immigration westernizes the human gut microbiome
sraprjeb28687
datamd540c0ce1b6815815e744fc170d8a379b8
mapmd5e8215641b4960b1727ffde73a840e12c

Annotations for experiment:

term enrichment score
TermScore
hmong0.363636
myanmar0.300000
karen0.300000
LOWER IN hmong0.222222
thailand0.159292
LOWER IN myanmar0.125000
LOWER IN karen0.125000
LOWER IN hmong 2nd generation0.125000
hmong 2nd generation0.125000
LOWER IN thailand0.117647
LOWER IN china0.111111
LOWER IN united states of america0.105263
rural community0.092308
LOWER IN rural community0.090909
low bmi0.086957
LOWER IN low bmi0.086957
LOWER IN high bmi0.083333
high bmi0.071429
female0.024291
china0.009274
adult0.008138
united states of america0.006633
homo sapiens0.005236
feces0.004587
Fraction of dbbact annotations with this term covered by the query
TermScore
myanmar0.500000
karen0.500000
LOWER IN hmong0.500000
hmong0.500000
LOWER IN myanmar0.500000
LOWER IN karen0.500000
LOWER IN hmong 2nd generation0.500000
hmong 2nd generation0.500000
LOWER IN thailand0.333333
LOWER IN china0.250000
LOWER IN rural community0.125000
low bmi0.111111
LOWER IN low bmi0.111111
LOWER IN high bmi0.100000
thailand0.090909
LOWER IN united states of america0.083333
high bmi0.071429
rural community0.058824
female0.012500
china0.004739
adult0.004098
united states of america0.003356
homo sapiens0.002625
feces0.002299
Fraction of annotations for the query sequences containing the term
TermScore
feces1.000000
homo sapiens1.000000
thailand0.642857
adult0.571429
female0.428571
united states of america0.285714
hmong0.285714
rural community0.214286
myanmar0.214286
karen0.214286
china0.214286
LOWER IN united states of america0.142857
LOWER IN hmong0.142857
LOWER IN thailand0.071429
LOWER IN rural community0.071429
LOWER IN china0.071429
LOWER IN myanmar0.071429
LOWER IN karen0.071429
low bmi0.071429
LOWER IN high bmi0.071429
LOWER IN hmong 2nd generation0.071429
hmong 2nd generation0.071429
high bmi0.071429
LOWER IN low bmi0.071429
Number of experiments associating the term to the sequence
TermScore
thailand1.000000
rural community1.000000
LOWER IN united states of america1.000000
feces1.000000
homo sapiens1.000000
united states of america1.000000
LOWER IN thailand1.000000
LOWER IN rural community1.000000
myanmar1.000000
karen1.000000
LOWER IN hmong1.000000
LOWER IN china1.000000
hmong1.000000
china1.000000
LOWER IN myanmar1.000000
LOWER IN karen1.000000
female1.000000
adult1.000000
low bmi1.000000
LOWER IN high bmi1.000000
LOWER IN hmong 2nd generation1.000000
hmong 2nd generation1.000000
high bmi1.000000
LOWER IN low bmi1.000000

Problems / suggestions? Please visit the dbBact forum