dbBact

Experiment ID: 417

Field	Description
name	habitat environments impacted the gut microbiome of long-distance migratory swan geese but central species conserved
sra	srp094679
datamd5	906039ba237f85ab520f6f0147de8be7
mapmd5	ac95282cbe14517c66c38626d94368af

Annotations for experiment:

term enrichment score

Term	Score
swan goose	0.666667
anser cygnoides	0.400000
LOWER IN mongolia	0.250000
mongolia	0.250000
LOWER IN china	0.200000
bird	0.111111
winter season	0.076923
LOWER IN winter season	0.071429
summer season	0.066667
LOWER IN summer season	0.058824
china	0.009479
feces	0.004598

Fraction of dbbact annotations with this term covered by the query

Term	Score
LOWER IN mongolia	0.500000
swan goose	0.500000
anser cygnoides	0.250000
LOWER IN china	0.250000
mongolia	0.166667
bird	0.058824
LOWER IN winter season	0.045455
winter season	0.041667
LOWER IN summer season	0.035714
summer season	0.035714
china	0.004785
feces	0.002304

Fraction of annotations for the query sequences containing the term

Term	Score
feces	1.000000
anser cygnoides	1.000000
bird	1.000000
swan goose	1.000000
winter season	0.500000
china	0.500000
mongolia	0.500000
summer season	0.500000
LOWER IN mongolia	0.166667
LOWER IN summer season	0.166667
LOWER IN winter season	0.166667
LOWER IN china	0.166667

Number of experiments associating the term to the sequence

Term	Score
winter season	1.000000
china	1.000000
LOWER IN mongolia	1.000000
LOWER IN summer season	1.000000
feces	1.000000
anser cygnoides	1.000000
bird	1.000000
swan goose	1.000000
mongolia	1.000000
summer season	1.000000
LOWER IN winter season	1.000000
LOWER IN china	1.000000

Exp. ID	User ID	Description	Date	Region	Sequences	Status	Flag
417	amnon	dominant feces, anser cygnoides, winter season, bird, swan goose, china	2018-12-01	v4	1 / 8	approved	No
417	amnon	dominant feces, mongolia, anser cygnoides, summer season, bird, swan goose	2018-12-01	v4	1 / 10	approved	No
417	amnon	common feces, mongolia, anser cygnoides, summer season, bird, swan goose	2018-12-01	v4	1 / 68	approved	No
417	amnon	common feces, anser cygnoides, winter season, bird, swan goose, china	2018-12-01	v4	1 / 70	approved	No
417	amnon	high in mongolia summer season compared to winter season china in feces anser cygnoides bird swan goose	2018-12-01	v4	1 / 114	approved	No
417	amnon	high in winter season china compared to mongolia summer season in feces anser cygnoides bird swan goose	2018-12-01	v4	1 / 132	approved	No

Problems / suggestions? Please visit the dbBact forum