dbBact

Experiment ID: 440

Field	Description
name	the gut of the finch: uniqueness of the gut microbiome of the galápagos vampire finch
sra	srp130314
datamd5	10df01a4d08c82e5ef1172cd5e238a64
mapmd5	946021a14724fb3e48f24824eaec8e1d

Annotations for experiment:

term enrichment score

Term	Score
finch	0.666667
galapagos islands	0.500000
geospiza fuliginosa	0.250000
small ground finch	0.250000
geospiza fortis	0.250000
medium ground finch	0.250000
camarhynchus parvulus	0.250000
small tree finch	0.250000
geospiza difficilis	0.250000
sharp-beaked ground finch	0.250000
geospiza scandens	0.250000
common cactus finch	0.250000
green warbler-finch	0.250000
certhidea olivacea	0.250000
bird	0.111111
feces	0.004619

Fraction of dbbact annotations with this term covered by the query

Term	Score
finch	0.500000
geospiza fuliginosa	0.500000
small ground finch	0.500000
geospiza fortis	0.500000
medium ground finch	0.500000
camarhynchus parvulus	0.500000
small tree finch	0.500000
geospiza difficilis	0.500000
sharp-beaked ground finch	0.500000
geospiza scandens	0.500000
common cactus finch	0.500000
green warbler-finch	0.500000
certhidea olivacea	0.500000
galapagos islands	0.333333
bird	0.058824
feces	0.002315

Fraction of annotations for the query sequences containing the term

Term	Score
feces	1.000000
galapagos islands	1.000000
bird	1.000000
finch	1.000000
geospiza fuliginosa	0.166667
small ground finch	0.166667
geospiza fortis	0.166667
medium ground finch	0.166667
camarhynchus parvulus	0.166667
small tree finch	0.166667
geospiza difficilis	0.166667
sharp-beaked ground finch	0.166667
geospiza scandens	0.166667
common cactus finch	0.166667
green warbler-finch	0.166667
certhidea olivacea	0.166667

Number of experiments associating the term to the sequence

Term	Score
feces	1.000000
galapagos islands	1.000000
bird	1.000000
finch	1.000000
geospiza fuliginosa	1.000000
small ground finch	1.000000
geospiza fortis	1.000000
medium ground finch	1.000000
camarhynchus parvulus	1.000000
small tree finch	1.000000
geospiza difficilis	1.000000
sharp-beaked ground finch	1.000000
geospiza scandens	1.000000
common cactus finch	1.000000
green warbler-finch	1.000000
certhidea olivacea	1.000000

Exp. ID	User ID	Description	Date	Region	Sequences	Status	Flag
440	amnon	common feces, geospiza fortis, galapagos islands, bird, finch, medium ground finch	2019-01-06	v4	1 / 4	approved	No
440	amnon	common feces, geospiza scandens, galapagos islands, bird, finch, common cactus finch	2019-01-06	v4	1 / 4	approved	No
440	amnon	common feces, galapagos islands, bird, finch, green warbler-finch, certhidea olivacea	2019-01-06	v4	1 / 5	approved	No
440	amnon	common feces, galapagos islands, bird, finch, geospiza fuliginosa, small ground finch	2019-01-06	v4	1 / 6	approved	No
440	amnon	dominant feces, galapagos islands, bird, finch, green warbler-finch, certhidea olivacea	2019-01-06	v4	1 / 8	approved	No
440	amnon	common feces, geospiza difficilis, galapagos islands, bird, finch, sharp-beaked ground finch	2019-01-06	v4	1 / 8	approved	No
440	amnon	common feces, galapagos islands, bird, finch, camarhynchus parvulus, small tree finch	2019-01-06	v4	1 / 8	approved	No
440	amnon	dominant feces, geospiza difficilis, galapagos islands, bird, finch, sharp-beaked ground finch	2019-01-06	v4	1 / 12	approved	No
440	amnon	dominant feces, geospiza scandens, galapagos islands, bird, finch, common cactus finch	2019-01-06	v4	1 / 12	approved	No
440	amnon	dominant feces, galapagos islands, bird, finch, camarhynchus parvulus, small tree finch	2019-01-06	v4	1 / 15	approved	No
440	amnon	dominant feces, geospiza fortis, galapagos islands, bird, finch, medium ground finch	2019-01-06	v4	1 / 16	approved	No
440	amnon	dominant feces, galapagos islands, bird, finch, geospiza fuliginosa, small ground finch	2019-01-06	v4	1 / 18	approved	No

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