dbBact

Experiment ID: 45

Field	Description
name	longitudinal analysis of the intestinal microbiota in persistently stunted young children in south india
sra	srp066115
datamd5	b1a1fad95b408c575dd58ad32d5d7d04
mapmd5	3b3408bff8af5021c59634e1f9394b8b

Annotations for experiment:

term enrichment score

Term	Score
india	0.153846
LOWER IN under-1-year-old human stage	0.142857
under-1-year-old human stage	0.125000
LOWER IN 1-year-old human stage	0.125000
1-year-old human stage	0.105263
age	0.086957
infant	0.052632
homo sapiens	0.005291
feces	0.004619

Fraction of dbbact annotations with this term covered by the query

Term	Score
LOWER IN under-1-year-old human stage	0.100000
india	0.083333
under-1-year-old human stage	0.083333
LOWER IN 1-year-old human stage	0.083333
1-year-old human stage	0.066667
age	0.047619
infant	0.027027
homo sapiens	0.002653
feces	0.002315

Fraction of annotations for the query sequences containing the term

Term	Score
feces	1.000000
homo sapiens	1.000000
infant	1.000000
india	1.000000
age	0.500000
1-year-old human stage	0.250000
LOWER IN under-1-year-old human stage	0.250000
under-1-year-old human stage	0.250000
LOWER IN 1-year-old human stage	0.250000

Number of experiments associating the term to the sequence

Term	Score
age	1.000000
1-year-old human stage	1.000000
LOWER IN under-1-year-old human stage	1.000000
feces	1.000000
homo sapiens	1.000000
infant	1.000000
india	1.000000
under-1-year-old human stage	1.000000
LOWER IN 1-year-old human stage	1.000000

Exp. ID	User ID	Description	Date	Region	Sequences	Status	Flag
45	amnon	high freq. in feces babies <2 years in india (dominant feces, homo sapiens, infant, india)	2016-12-19	v4	1 / 20	approved	No
45	amnon	common in feces babies age 0-2 in india (common feces, homo sapiens, infant, india)	2016-12-19	v4	1 / 31	approved	No
45	amnon	higher in younf babies compared to 2 year olds in india ( high in age under-1-year-old human stage compared to 1-year-old human stage in feces homo sapiens infant india )	2016-12-19	v4	1 / 56	approved	No
45	amnon	lower in young babies compared to 2 year olds in india ( high in age 1-year-old human stage compared to under-1-year-old human stage in feces homo sapiens infant india )	2016-12-19	v4	1 / 253	approved	No

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