Experiment ID: 462

Field Description
namethe populus holobiont: dissecting the effects of plant niches and genotype on the microbiome
sraprjna385484
datamd5f72c81dc4a3dddacfe8a91dd9809da1b
mapmd553b58ab40478f5160743f5c772ece01c

Annotations for experiment:

Fraction of dbbact annotations with this term covered by the query
TermScore
populus0.500000
LOWER IN silt clay loam0.500000
LOWER IN detph 30-75cm0.500000
silt clay loam0.500000
depth 30-75cm0.500000
LOWER IN silt loam0.500000
populus deltoides0.500000
LOWER IN populus trichocarpa x deltoides0.500000
populus trichocarpa x deltoides0.500000
LOWER IN populus deltoides0.500000
depth (soil) 20-60cm0.333333
LOWER IN stem0.333333
LOWER IN depth (soil) 0-30 cm0.333333
depth (soil) 0-30 cm0.250000
state of tennessee0.200000
tree0.200000
silt loam0.166667
stem0.142857
LOWER IN leaf0.142857
cultivated environment0.125000
LOWER IN depth (soil) 0-20cm0.125000
LOWER IN root0.090909
root0.066667
LOWER IN soil0.058824
depth (soil) 0-20cm0.050000
LOWER IN rhizosphere0.050000
leaf0.045455
rhizosphere0.019608
soil0.009901
united states of america0.003448
Fraction of annotations for the query sequences containing the term
TermScore
united states of america1.000000
state of tennessee1.000000
cultivated environment1.000000
populus0.800000
tree0.800000
soil0.233333
stem0.233333
rhizosphere0.200000
silt loam0.166667
depth (soil) 0-20cm0.166667
depth (soil) 0-30 cm0.166667
silt clay loam0.166667
depth 30-75cm0.166667
depth (soil) 20-60cm0.166667
leaf0.166667
populus deltoides0.166667
populus trichocarpa x deltoides0.166667
root0.166667
LOWER IN populus trichocarpa x deltoides0.100000
LOWER IN populus deltoides0.100000
LOWER IN rhizosphere0.066667
LOWER IN root0.033333
LOWER IN silt clay loam0.033333
LOWER IN detph 30-75cm0.033333
LOWER IN soil0.033333
LOWER IN stem0.033333
LOWER IN silt loam0.033333
LOWER IN depth (soil) 0-20cm0.033333
LOWER IN depth (soil) 0-30 cm0.033333
LOWER IN leaf0.033333
Number of experiments associating the term to the sequence
TermScore
rhizosphere1.000000
LOWER IN root1.000000
united states of america1.000000
state of tennessee1.000000
populus1.000000
tree1.000000
cultivated environment1.000000
silt loam1.000000
depth (soil) 0-20cm1.000000
depth (soil) 0-30 cm1.000000
LOWER IN silt clay loam1.000000
LOWER IN detph 30-75cm1.000000
soil1.000000
LOWER IN soil1.000000
silt clay loam1.000000
depth 30-75cm1.000000
depth (soil) 20-60cm1.000000
leaf1.000000
LOWER IN stem1.000000
LOWER IN silt loam1.000000
LOWER IN depth (soil) 0-20cm1.000000
LOWER IN depth (soil) 0-30 cm1.000000
populus deltoides1.000000
LOWER IN populus trichocarpa x deltoides1.000000
stem1.000000
LOWER IN leaf1.000000
populus trichocarpa x deltoides1.000000
LOWER IN populus deltoides1.000000
root1.000000
LOWER IN rhizosphere1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
462amnondominant united states of america, state of tennessee, rhizosphere, populus, tree, silt loam, cultivated environment, depth (soil) 0-20cm, depth (soil) 0-30 cm2019-01-13v41 / 3approvedNo
462amnondominant united states of america, state of tennessee, stem, populus, populus deltoides, tree, cultivated environment2019-01-13v41 / 3approvedNo
462amnondominant united states of america, state of tennessee, soil, silt loam, cultivated environment, depth (soil) 0-20cm, depth (soil) 0-30 cm2019-01-13v41 / 4approvedNo
462amnondominant united states of america, state of tennessee, rhizosphere, populus, tree, silt clay loam, depth 30-75cm, cultivated environment, depth (soil) 20-60cm2019-01-13v41 / 6approvedNo
462amnondominant united states of america, state of tennessee, soil, silt clay loam, depth 30-75cm, cultivated environment, depth (soil) 20-60cm2019-01-13v41 / 8approvedNo
462amnondominant united states of america, state of tennessee, populus, tree, cultivated environment, root2019-01-13v41 / 9approvedNo
462amnondominant united states of america, state of tennessee, stem, populus, tree, populus trichocarpa x deltoides, cultivated environment2019-01-13v41 / 12approvedNo
462amnondominant united states of america, state of tennessee, leaf, populus, tree, cultivated environment2019-01-13v41 / 15approvedNo
462amnoncommon united states of america, state of tennessee, leaf, populus, tree, cultivated environment2019-01-13v41 / 28approvedNo
462amnoncommon united states of america, state of tennessee, stem, populus, populus deltoides, tree, cultivated environment2019-01-13v41 / 29approvedNo
462amnoncommon united states of america, state of tennessee, stem, populus, tree, populus trichocarpa x deltoides, cultivated environment2019-01-13v41 / 48approvedNo
462amnoncommon united states of america, state of tennessee, populus, tree, cultivated environment, root2019-01-13v41 / 51approvedNo
462amnon high in root compared to rhizosphere in united states of america state of tennessee populus tree cultivated environment 2019-01-13v41 / 57approvedNo
462amnon high in populus trichocarpa x deltoides compared to populus deltoides in united states of america state of tennessee leaf populus tree cultivated environment 2019-01-13v41 / 76approvedNo
462amnon high in soil compared to rhizosphere in united states of america state of tennessee populus tree cultivated environment 2019-01-12v41 / 131approvedNo
462amnon high in populus deltoides compared to populus trichocarpa x deltoides in united states of america state of tennessee stem populus tree cultivated environment 2019-01-13v41 / 166approvedNo
462amnon high in populus trichocarpa x deltoides compared to populus deltoides in united states of america state of tennessee stem populus tree cultivated environment 2019-01-13v41 / 249approvedNo
462amnon high in populus deltoides compared to populus trichocarpa x deltoides in united states of america state of tennessee populus tree cultivated environment root 2019-01-13v41 / 254approvedNo
462amnon high in populus trichocarpa x deltoides compared to populus deltoides in united states of america state of tennessee populus tree cultivated environment root 2019-01-13v41 / 300approvedNo
462amnon high in stem compared to leaf in united states of america state of tennessee populus tree cultivated environment 2019-01-13v41 / 477approvedNo
462amnon high in populus deltoides compared to populus trichocarpa x deltoides in united states of america state of tennessee leaf populus tree cultivated environment 2019-01-13v41 / 559approvedNo
462amnon high in silt clay loam depth 30-75cm depth (soil) 20-60cm compared to silt loam depth (soil) 0-20cm depth (soil) 0-30 cm in united states of america state of tennessee soil cultivated environment 2019-01-12v41 / 665approvedNo
462amnoncommon united states of america, state of tennessee, soil, silt clay loam, depth 30-75cm, cultivated environment, depth (soil) 20-60cm2019-01-13v41 / 728approvedNo
462amnon high in leaf compared to stem in united states of america state of tennessee populus tree cultivated environment 2019-01-13v41 / 890approvedNo
462amnoncommon united states of america, state of tennessee, rhizosphere, populus, tree, silt clay loam, depth 30-75cm, cultivated environment, depth (soil) 20-60cm2019-01-13v41 / 908approvedNo
462amnoncommon united states of america, state of tennessee, soil, silt loam, cultivated environment, depth (soil) 0-20cm, depth (soil) 0-30 cm2019-01-13v41 / 938approvedNo
462amnoncommon united states of america, state of tennessee, rhizosphere, populus, tree, silt loam, cultivated environment, depth (soil) 0-20cm, depth (soil) 0-30 cm2019-01-13v41 / 997approvedNo
462amnon high in rhizosphere compared to soil in united states of america state of tennessee populus tree cultivated environment 2019-01-12v41 / 1428approvedNo
462amnon high in silt loam depth (soil) 0-20cm depth (soil) 0-30 cm compared to silt clay loam detph 30-75cm in united states of america state of tennessee soil cultivated environment 2019-01-12v41 / 1648approvedNo
462amnon high in rhizosphere compared to root in united states of america state of tennessee populus tree cultivated environment 2019-01-13v41 / 4630approvedNo

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