dbBact

Experiment ID: 467

Field	Description
name	effects of arabinoxylan and resistant starch on intestinal microbiota and short-chain fatty acids in subjects with metabolic syndrome: a randomised crossover study
sra	srp064518
datamd5	9b434106dc87c99313031147bbd643a3
mapmd5	2dd83fd3911631927fbe561ce44423ca

Annotations for experiment:

term enrichment score

Term	Score
metabolic syndrome	0.500000
LOWER IN high arabinoxylan and resistant starch diet	0.333333
LOWER IN arabinoxylan diet	0.333333
high arabinoxylan and resistant starch diet	0.333333
LOWER IN plant fiber cell	0.285714
plant fiber cell	0.285714
high fiber	0.222222
LOWER IN high fiber	0.200000
kingdom of denmark	0.166667
control diet	0.095238
LOWER IN control diet	0.095238
adult	0.008621
homo sapiens	0.005510
feces	0.004739

Fraction of dbbact annotations with this term covered by the query

Term	Score
LOWER IN high arabinoxylan and resistant starch diet	0.500000
LOWER IN arabinoxylan diet	0.500000
high arabinoxylan and resistant starch diet	0.500000
metabolic syndrome	0.333333
LOWER IN plant fiber cell	0.333333
plant fiber cell	0.333333
high fiber	0.200000
LOWER IN high fiber	0.166667
kingdom of denmark	0.090909
control diet	0.058824
LOWER IN control diet	0.058824
adult	0.004329
homo sapiens	0.002762
feces	0.002375

Fraction of annotations for the query sequences containing the term

Term	Score
feces	1.000000
homo sapiens	1.000000
metabolic syndrome	1.000000
adult	1.000000
kingdom of denmark	1.000000
control diet	0.250000
LOWER IN high fiber	0.250000
LOWER IN plant fiber cell	0.250000
LOWER IN high arabinoxylan and resistant starch diet	0.250000
LOWER IN arabinoxylan diet	0.250000
high fiber	0.250000
plant fiber cell	0.250000
high arabinoxylan and resistant starch diet	0.250000
LOWER IN control diet	0.250000

Number of experiments associating the term to the sequence

Term	Score
feces	1.000000
homo sapiens	1.000000
metabolic syndrome	1.000000
adult	1.000000
kingdom of denmark	1.000000
control diet	1.000000
LOWER IN high fiber	1.000000
LOWER IN plant fiber cell	1.000000
LOWER IN high arabinoxylan and resistant starch diet	1.000000
LOWER IN arabinoxylan diet	1.000000
high fiber	1.000000
plant fiber cell	1.000000
high arabinoxylan and resistant starch diet	1.000000
LOWER IN control diet	1.000000

Exp. ID	User ID	Description	Date	Region	Sequences	Status	Flag
467	amnon	higher in arabinoxylan and resistant starch diet compared to normal diet ( high in high fiber plant fiber cell high arabinoxylan and resistant starch diet compared to control diet in feces homo sapiens metabolic syndrome adult kingdom of denmark )	2019-01-14	v4	1 / 1	approved	No
467	amnon	lower in arabinoxylan and resistant starch diet compared to normal diet ( high in control diet compared to high fiber plant fiber cell high arabinoxylan and resistant starch diet arabinoxylan diet in feces homo sapiens metabolic syndrome adult kingdom of denmark )	2019-01-14	v4	1 / 9	approved	No
467	amnon	dominant feces, homo sapiens, metabolic syndrome, adult, kingdom of denmark	2019-01-14	v4	1 / 22	approved	No
467	amnon	common feces, homo sapiens, metabolic syndrome, adult, kingdom of denmark	2019-01-14	v4	1 / 328	approved	No

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