dbBact

Experiment ID: 487

Field	Description
name	impact of dietary resistant starch type 4 on human gut microbiota and immunometabolic functions
sra	prjna308315
datamd5	c43a3cdeada4b617d8759d30e3e89920
mapmd5	87efa2cba5bf45fd1aecc6cfb6831ca5

Annotations for experiment:

term enrichment score

Term	Score
metabolic syndrome x	0.666667
metabolic syndrome	0.500000
resistant starch type 4 diet	0.333333
LOWER IN resistant starch type 4 diet	0.333333
starch diet	0.250000
LOWER IN starch diet	0.250000
LOWER IN control diet	0.095238
control diet	0.095238
diet	0.071429
united states of america	0.006689
homo sapiens	0.005291
feces	0.004619

Fraction of dbbact annotations with this term covered by the query

Term	Score
metabolic syndrome x	0.500000
resistant starch type 4 diet	0.500000
LOWER IN resistant starch type 4 diet	0.500000
metabolic syndrome	0.333333
starch diet	0.250000
LOWER IN starch diet	0.250000
LOWER IN control diet	0.058824
control diet	0.058824
diet	0.041667
united states of america	0.003356
homo sapiens	0.002653
feces	0.002315

Fraction of annotations for the query sequences containing the term

Term	Score
feces	1.000000
homo sapiens	1.000000
united states of america	1.000000
metabolic syndrome x	1.000000
metabolic syndrome	1.000000
diet	0.250000
starch diet	0.250000
resistant starch type 4 diet	0.250000
LOWER IN control diet	0.250000
control diet	0.250000
LOWER IN starch diet	0.250000
LOWER IN resistant starch type 4 diet	0.250000

Number of experiments associating the term to the sequence

Term	Score
feces	1.000000
homo sapiens	1.000000
united states of america	1.000000
metabolic syndrome x	1.000000
metabolic syndrome	1.000000
diet	1.000000
starch diet	1.000000
resistant starch type 4 diet	1.000000
LOWER IN control diet	1.000000
control diet	1.000000
LOWER IN starch diet	1.000000
LOWER IN resistant starch type 4 diet	1.000000

Exp. ID	User ID	Description	Date	Region	Sequences	Status	Flag
487	amnon	lower in metabolic syndrome patients following resistant starch diet compared to control flour diet ( high in control diet compared to starch diet resistant starch type 4 diet in feces homo sapiens united states of america metabolic syndrome x metabolic syndrome )	2019-02-24	v4	1 / 3	approved	No
487	amnon	higher in metabolic syndrome patients following resistant starch diet compared to control flour diet ( high in diet starch diet resistant starch type 4 diet compared to control diet in feces homo sapiens united states of america metabolic syndrome x metabolic syndrome )	2019-02-24	v4	1 / 6	approved	No
487	amnon	dominant feces, homo sapiens, united states of america, metabolic syndrome x, metabolic syndrome	2019-02-24	v4	1 / 23	approved	No
487	amnon	common feces, homo sapiens, united states of america, metabolic syndrome x, metabolic syndrome	2019-02-24	v4	1 / 88	approved	No

Problems / suggestions? Please visit the dbBact forum