Experiment ID: 53

Field Description
nameinterconnected microbiomes and resistomes in low-income human habitats
srasrp066479
datamd571aab4114a4c346751a32a289231ee12
mapmd5da191ea79351beaaee72bf09a9b19c62

Annotations for experiment:

term enrichment score
TermScore
el salvador0.375000
lima0.375000
shantytown0.375000
south america0.363636
low income0.285714
small village0.272727
wastewater treatment plant0.193548
LOWER IN sewage0.166667
LOWER IN influent0.166667
sewage0.166667
LOWER IN effluent0.166667
LOWER IN lima0.166667
LOWER IN shantytown0.166667
LOWER IN el salado0.166667
LOWER IN sewer0.166667
sewer0.166667
influent0.153846
LOWER IN wastewater treatment plant0.153846
effluent0.142857
LOWER IN small village0.142857
city0.080000
LOWER IN feces0.050000
homo sapiens0.005518
feces0.004757
Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN sewage0.500000
LOWER IN influent0.500000
sewage0.500000
LOWER IN effluent0.500000
el salvador0.500000
LOWER IN lima0.500000
LOWER IN shantytown0.500000
lima0.500000
shantytown0.500000
LOWER IN el salado0.500000
LOWER IN sewer0.500000
low income0.500000
sewer0.500000
south america0.333333
influent0.333333
LOWER IN wastewater treatment plant0.333333
effluent0.250000
small village0.250000
LOWER IN small village0.250000
wastewater treatment plant0.142857
city0.041667
LOWER IN feces0.033333
homo sapiens0.002770
feces0.002387
Fraction of annotations for the query sequences containing the term
TermScore
city1.000000
feces0.700000
homo sapiens0.700000
south america0.400000
wastewater treatment plant0.300000
el salvador0.300000
small village0.300000
lima0.300000
shantytown0.300000
low income0.200000
effluent0.100000
LOWER IN sewage0.100000
LOWER IN influent0.100000
sewage0.100000
influent0.100000
LOWER IN effluent0.100000
LOWER IN lima0.100000
LOWER IN shantytown0.100000
LOWER IN el salado0.100000
LOWER IN small village0.100000
LOWER IN wastewater treatment plant0.100000
LOWER IN sewer0.100000
sewer0.100000
LOWER IN feces0.100000
Number of experiments associating the term to the sequence
TermScore
effluent1.000000
LOWER IN sewage1.000000
LOWER IN influent1.000000
city1.000000
wastewater treatment plant1.000000
south america1.000000
sewage1.000000
influent1.000000
LOWER IN effluent1.000000
el salvador1.000000
small village1.000000
LOWER IN lima1.000000
LOWER IN shantytown1.000000
feces1.000000
homo sapiens1.000000
lima1.000000
shantytown1.000000
LOWER IN el salado1.000000
LOWER IN small village1.000000
LOWER IN wastewater treatment plant1.000000
LOWER IN sewer1.000000
low income1.000000
sewer1.000000
LOWER IN feces1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
53amnondominant feces, homo sapiens, city, el salvador, small village2017-01-21v41 / 23approvedNo
53amnondominant feces, homo sapiens, city, lima, shantytown2017-01-21v41 / 25approvedNo
53amnoncommon feces, homo sapiens, city, lima, shantytown2017-01-21v41 / 110approvedNo
53amnonhigher in sewer and wastewater influent comapred to feces in low income south america ( high in wastewater treatment plant sewer compared to feces in city south america low income )2017-01-21v41 / 148approvedNo
53amnoncommon feces, homo sapiens, city, el salvador, small village2017-01-21v41 / 155approvedNo
53amnonlower in sewer and wastewater treatment plant influent compared to feces in south america ( high in feces homo sapiens compared to wastewater treatment plant sewer in city south america low income )2017-01-21v41 / 187approvedNo
53amnon high in lima shantytown compared to el salado small village in feces homo sapiens city 2017-01-21v41 / 236approvedNo
53amnon high in el salvador small village compared to lima shantytown in feces homo sapiens city 2017-01-21v41 / 296approvedNo
53amnonlower in wastewater plant effluent compared to influent and sewer in south america ( high in sewage influent compared to effluent in city wastewater treatment plant south america )2017-01-21v41 / 440approvedNo
53amnonhigher in wastewater plant effluent compared to influent and sewer in south america ( high in effluent compared to sewage influent in city wastewater treatment plant south america )2017-01-21v41 / 657approvedNo

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