Experiment ID: 536

Field Description
namevariability in snake skin microbial assemblages across spatial scales and disease states
sraprjna531014
doihttps://doi.org/10.1038/s41396-019-0416-x
datamd5cf1b7254161162e0f4a73425a5e951db
mapmd599129ba352a9a96fd801dd428e62a30e

Annotations for experiment:

Fraction of dbbact annotations with this term covered by the query
TermScore
aquatic snake0.500000
LOWER IN terrestrial snake0.500000
southern united states0.500000
terrestrial snake0.500000
LOWER IN aquatic snake0.500000
agkistrodon contortrix0.500000
copperhead snake0.500000
pantherophis obsoletus0.500000
black rat snake0.500000
arboreal snake0.500000
agkistrodon piscivorus0.500000
nerodia sipedon0.500000
northern water snake0.500000
thamnophis sirtalis0.500000
common garter snake0.500000
crotalus horridus0.500000
timber rattlesnake0.500000
fossorial snake0.500000
storeria dekayi0.500000
ground snake0.500000
coluber constrictor0.500000
eastern racer snake0.500000
carphophis amoenus0.500000
worm snake0.500000
diadophis punctatus0.500000
ringneck snake0.500000
snake0.333333
skin0.024390
united states of america0.003425
Fraction of annotations for the query sequences containing the term
TermScore
united states of america1.000000
skin1.000000
snake1.000000
southern united states1.000000
fossorial snake0.272727
aquatic snake0.227273
agkistrodon contortrix0.090909
copperhead snake0.090909
pantherophis obsoletus0.090909
black rat snake0.090909
arboreal snake0.090909
agkistrodon piscivorus0.090909
nerodia sipedon0.090909
northern water snake0.090909
thamnophis sirtalis0.090909
common garter snake0.090909
crotalus horridus0.090909
timber rattlesnake0.090909
storeria dekayi0.090909
ground snake0.090909
coluber constrictor0.090909
eastern racer snake0.090909
carphophis amoenus0.090909
worm snake0.090909
diadophis punctatus0.090909
ringneck snake0.090909
LOWER IN terrestrial snake0.045455
terrestrial snake0.045455
LOWER IN aquatic snake0.045455
Number of experiments associating the term to the sequence
TermScore
aquatic snake1.000000
LOWER IN terrestrial snake1.000000
united states of america1.000000
skin1.000000
snake1.000000
southern united states1.000000
terrestrial snake1.000000
LOWER IN aquatic snake1.000000
agkistrodon contortrix1.000000
copperhead snake1.000000
pantherophis obsoletus1.000000
black rat snake1.000000
arboreal snake1.000000
agkistrodon piscivorus1.000000
nerodia sipedon1.000000
northern water snake1.000000
thamnophis sirtalis1.000000
common garter snake1.000000
crotalus horridus1.000000
timber rattlesnake1.000000
fossorial snake1.000000
storeria dekayi1.000000
ground snake1.000000
coluber constrictor1.000000
eastern racer snake1.000000
carphophis amoenus1.000000
worm snake1.000000
diadophis punctatus1.000000
ringneck snake1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
536amnondominant united states of america, skin, snake, southern united states, agkistrodon contortrix, copperhead snake2019-07-28v41 / 12approvedNo
536amnondominant united states of america, skin, snake, southern united states, agkistrodon piscivorus, aquatic snake2019-07-28v41 / 13approvedNo
536amnondominant united states of america, skin, pantherophis obsoletus, snake, southern united states, black rat snake, arboreal snake2019-07-28v41 / 13approvedNo
536amnondominant united states of america, skin, snake, southern united states, aquatic snake, nerodia sipedon, northern water snake2019-07-28v41 / 14approvedNo
536amnondominant united states of america, skin, snake, southern united states, fossorial snake, storeria dekayi, ground snake2019-07-28v41 / 15approvedNo
536amnondominant united states of america, skin, snake, crotalus horridus, southern united states, timber rattlesnake2019-07-28v41 / 16approvedNo
536amnondominant united states of america, skin, snake, southern united states, thamnophis sirtalis, common garter snake2019-07-28v41 / 18approvedNo
536amnondominant united states of america, skin, snake, southern united states, coluber constrictor, eastern racer snake2019-07-28v41 / 20approvedNo
536amnondominant united states of america, skin, snake, southern united states, fossorial snake, carphophis amoenus, worm snake2019-07-28v41 / 20approvedNo
536amnondominant united states of america, skin, snake, southern united states, diadophis punctatus, ringneck snake, fossorial snake2019-07-28v41 / 21approvedNo
536amnoncommon united states of america, skin, snake, southern united states, diadophis punctatus, ringneck snake, fossorial snake2019-07-28v41 / 26approvedNo
536amnoncommon united states of america, skin, snake, southern united states, fossorial snake, carphophis amoenus, worm snake2019-07-28v41 / 35approvedNo
536amnoncommon united states of america, skin, snake, southern united states, coluber constrictor, eastern racer snake2019-07-28v41 / 64approvedNo
536amnoncommon united states of america, skin, snake, crotalus horridus, southern united states, timber rattlesnake2019-07-28v41 / 101approvedNo
536amnoncommon united states of america, skin, snake, southern united states, fossorial snake, storeria dekayi, ground snake2019-07-28v41 / 101approvedNo
536amnoncommon united states of america, skin, snake, southern united states, thamnophis sirtalis, common garter snake2019-07-28v41 / 110approvedNo
536amnoncommon united states of america, skin, snake, southern united states, aquatic snake, nerodia sipedon, northern water snake2019-07-28v41 / 111approvedNo
536amnoncommon united states of america, skin, snake, southern united states, agkistrodon piscivorus, aquatic snake2019-07-28v41 / 115approvedNo
536amnoncommon united states of america, skin, pantherophis obsoletus, snake, southern united states, black rat snake, arboreal snake2019-07-28v41 / 184approvedNo
536amnoncommon united states of america, skin, snake, southern united states, agkistrodon contortrix, copperhead snake2019-07-28v41 / 236approvedNo
536amnon high in terrestrial snake compared to aquatic snake in united states of america skin snake southern united states 2019-07-28v41 / 590approvedNo
536amnon high in aquatic snake compared to terrestrial snake in united states of america skin snake southern united states 2019-07-28v41 / 1772approvedNo

Problems / suggestions? Please visit the dbBact forum