Experiment ID: 558

Field Description
namedistinct microbiotas of anatomical gut regions display idiosyncratic seasonal variation in an avian folivore
sraprjna478431
doihttps://doi.org/10.1186/s42523-019-0002-6
datamd524d8dbc250d6f9b8b4abc5fbc97f290c
mapmd59397becb4a830d808ee17a836a9da726

Annotations for experiment:

term enrichment score
TermScore
centrocercus urophasianus0.666667
greater sage-grouse0.666667
state of wyoming0.500000
gizzard0.285714
crop0.230769
LOWER IN gizzard0.166667
bird0.111111
duodenum0.105263
LOWER IN crop0.090909
LOWER IN duodenum0.090909
LOWER IN caecum0.068966
colon0.067416
LOWER IN colon0.052632
LOWER IN winter season0.047619
winter season0.045455
summer season0.041667
LOWER IN summer season0.041667
caecum0.037037
united states of america0.006849
Fraction of dbbact annotations with this term covered by the query
TermScore
centrocercus urophasianus0.500000
greater sage-grouse0.500000
gizzard0.500000
LOWER IN crop0.500000
crop0.500000
LOWER IN gizzard0.500000
state of wyoming0.333333
LOWER IN duodenum0.083333
duodenum0.071429
bird0.058824
LOWER IN colon0.055556
LOWER IN caecum0.052632
LOWER IN winter season0.045455
colon0.043478
winter season0.041667
summer season0.035714
LOWER IN summer season0.035714
caecum0.020408
united states of america0.003436
Fraction of annotations for the query sequences containing the term
TermScore
united states of america1.000000
state of wyoming1.000000
bird1.000000
centrocercus urophasianus1.000000
greater sage-grouse1.000000
caecum0.200000
gizzard0.200000
duodenum0.200000
colon0.150000
crop0.150000
LOWER IN duodenum0.100000
LOWER IN caecum0.100000
LOWER IN gizzard0.100000
LOWER IN crop0.050000
LOWER IN colon0.050000
summer season0.050000
LOWER IN winter season0.050000
winter season0.050000
LOWER IN summer season0.050000
Number of experiments associating the term to the sequence
TermScore
caecum1.000000
LOWER IN duodenum1.000000
united states of america1.000000
state of wyoming1.000000
bird1.000000
centrocercus urophasianus1.000000
greater sage-grouse1.000000
gizzard1.000000
LOWER IN crop1.000000
LOWER IN colon1.000000
summer season1.000000
LOWER IN winter season1.000000
winter season1.000000
LOWER IN summer season1.000000
colon1.000000
LOWER IN caecum1.000000
crop1.000000
LOWER IN gizzard1.000000
duodenum1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
558amnon high in duodenum compared to gizzard in united states of america state of wyoming bird centrocercus urophasianus greater sage-grouse 2019-09-20v41 / 1approvedNo
558amnoncommon united states of america, crop, state of wyoming, bird, centrocercus urophasianus, greater sage-grouse2019-09-20v41 / 7approvedNo
558amnondominant united states of america, crop, state of wyoming, bird, centrocercus urophasianus, greater sage-grouse2019-09-20v41 / 11approvedNo
558amnondominant united states of america, colon, state of wyoming, bird, centrocercus urophasianus, greater sage-grouse2019-09-20v41 / 19approvedNo
558amnondominant united states of america, duodenum, state of wyoming, bird, centrocercus urophasianus, greater sage-grouse2019-09-20v41 / 19approvedNo
558amnondominant united states of america, gizzard, state of wyoming, bird, centrocercus urophasianus, greater sage-grouse2019-09-20v41 / 23approvedNo
558amnondominant united states of america, caecum, state of wyoming, bird, centrocercus urophasianus, greater sage-grouse2019-09-20v41 / 26approvedNo
558amnoncommon united states of america, duodenum, state of wyoming, bird, centrocercus urophasianus, greater sage-grouse2019-09-20v41 / 45approvedNo
558amnon high in gizzard compared to duodenum in united states of america state of wyoming bird centrocercus urophasianus greater sage-grouse 2019-09-20v41 / 48approvedNo
558amnon high in duodenum compared to caecum in united states of america state of wyoming bird centrocercus urophasianus greater sage-grouse 2019-09-20v41 / 64approvedNo
558amnoncommon united states of america, colon, state of wyoming, bird, centrocercus urophasianus, greater sage-grouse2019-09-20v41 / 66approvedNo
558amnon high in crop compared to gizzard in united states of america state of wyoming bird centrocercus urophasianus greater sage-grouse 2019-09-20v41 / 69approvedNo
558amnon high in colon compared to caecum in united states of america state of wyoming bird centrocercus urophasianus greater sage-grouse 2019-09-20v41 / 97approvedNo
558amnoncommon united states of america, gizzard, state of wyoming, bird, centrocercus urophasianus, greater sage-grouse2019-09-20v41 / 97approvedNo
558amnon high in winter season compared to summer season in united states of america state of wyoming bird centrocercus urophasianus greater sage-grouse 2019-09-20v41 / 103approvedNo
558amnoncommon united states of america, caecum, state of wyoming, bird, centrocercus urophasianus, greater sage-grouse2019-09-20v41 / 155approvedNo
558amnon high in summer season compared to winter season in united states of america state of wyoming bird centrocercus urophasianus greater sage-grouse 2019-09-20v41 / 274approvedNo
558amnon high in caecum compared to colon in united states of america state of wyoming bird centrocercus urophasianus greater sage-grouse 2019-09-20v41 / 359approvedNo
558amnon high in gizzard compared to crop in united states of america state of wyoming bird centrocercus urophasianus greater sage-grouse 2019-09-20v41 / 408approvedNo
558amnon high in caecum compared to duodenum in united states of america state of wyoming bird centrocercus urophasianus greater sage-grouse 2019-09-20v41 / 488approvedNo

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