Experiment ID: 561

Field Description
nameyak rumen microbial diversity at different forage growth stages of an alpine meadow on the qinghai-tibet plateau
sraprjna504932
doihttps://doi.org/10.7717/peerj.7645
datamd57839f00b52219e69ca06512e42270e9d
mapmd52e8523d91ca2c41d95c6a62738f2cec1

Annotations for experiment:

term enrichment score
TermScore
alpine meadow0.666667
yak0.333333
green stage diet0.333333
LOWER IN grass growth diet0.333333
withered grass diet0.333333
grass growth diet0.333333
LOWER IN withered grass diet0.333333
LOWER IN green stage diet0.333333
tibetan plateau0.285714
bos grunniens0.285714
ruminal fluid0.181818
LOWER IN spring season0.133333
spring season0.111111
LOWER IN winter season0.076923
rumen0.071429
winter season0.071429
LOWER IN summer season0.062500
summer season0.062500
china0.009390
Fraction of dbbact annotations with this term covered by the query
TermScore
alpine meadow0.500000
green stage diet0.500000
LOWER IN grass growth diet0.500000
withered grass diet0.500000
grass growth diet0.500000
LOWER IN withered grass diet0.500000
LOWER IN green stage diet0.500000
yak0.200000
tibetan plateau0.166667
bos grunniens0.166667
ruminal fluid0.100000
LOWER IN spring season0.090909
spring season0.071429
LOWER IN winter season0.045455
winter season0.041667
rumen0.037037
LOWER IN summer season0.035714
summer season0.035714
china0.004717
Fraction of annotations for the query sequences containing the term
TermScore
rumen1.000000
tibetan plateau1.000000
bos grunniens1.000000
yak1.000000
ruminal fluid1.000000
china1.000000
alpine meadow1.000000
green stage diet0.250000
spring season0.250000
LOWER IN summer season0.250000
LOWER IN grass growth diet0.250000
winter season0.250000
withered grass diet0.250000
summer season0.250000
grass growth diet0.250000
LOWER IN winter season0.250000
LOWER IN withered grass diet0.250000
LOWER IN green stage diet0.250000
LOWER IN spring season0.250000
Number of experiments associating the term to the sequence
TermScore
rumen1.000000
tibetan plateau1.000000
bos grunniens1.000000
yak1.000000
ruminal fluid1.000000
china1.000000
alpine meadow1.000000
green stage diet1.000000
spring season1.000000
LOWER IN summer season1.000000
LOWER IN grass growth diet1.000000
winter season1.000000
withered grass diet1.000000
summer season1.000000
grass growth diet1.000000
LOWER IN winter season1.000000
LOWER IN withered grass diet1.000000
LOWER IN green stage diet1.000000
LOWER IN spring season1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
561amnondominant rumen, tibetan plateau, bos grunniens, yak, ruminal fluid, china, alpine meadow2019-11-05v31 / 3approvedNo
561amnon high in winter season withered grass diet compared to green stage diet spring season in rumen tibetan plateau bos grunniens yak ruminal fluid china alpine meadow 2019-11-05v31 / 18approvedNo
561amnon high in green stage diet spring season compared to winter season withered grass diet in rumen tibetan plateau bos grunniens yak ruminal fluid china alpine meadow 2019-11-05v31 / 35approvedNo
561amnon high in summer season grass growth diet compared to green stage diet spring season in rumen tibetan plateau bos grunniens yak ruminal fluid china alpine meadow 2019-11-05v31 / 256approvedNo
561amnon high in summer season grass growth diet compared to winter season withered grass diet in rumen tibetan plateau bos grunniens yak ruminal fluid china alpine meadow 2019-11-05v31 / 294approvedNo
561amnon high in winter season withered grass diet compared to summer season grass growth diet in rumen tibetan plateau bos grunniens yak ruminal fluid china alpine meadow 2019-11-05v31 / 357approvedNo
561amnon high in green stage diet spring season compared to summer season grass growth diet in rumen tibetan plateau bos grunniens yak ruminal fluid china alpine meadow 2019-11-05v31 / 397approvedNo
561amnoncommon rumen, tibetan plateau, bos grunniens, yak, ruminal fluid, china, alpine meadow2019-11-05v31 / 670approvedNo

Problems / suggestions? Please visit the dbBact forum