Experiment ID: 578

Field Description
namegut microbiota linked to sexual preference and hiv infection
sraprjna307231
doihttp://dx.doi.org/10.1016/j.ebiom.2016.01.032
datamd5deffe85ec5dd0ab12e14c7ae296bb90c
mapmd53ccef36d5fb4b76ef3b12898f4406222

Annotations for experiment:

term enrichment score
TermScore
gay0.360000
heterosexual0.256410
msw0.256410
homosexual0.209302
msm0.209302
hiv infection0.159292
LOWER IN sweden0.117647
LOWER IN kingdom of spain0.117647
sweden0.117117
LOWER IN gay0.111111
LOWER IN heterosexual0.105263
LOWER IN msw0.105263
LOWER IN homosexual0.105263
LOWER IN msm0.105263
LOWER IN hiv infection0.086957
kingdom of spain0.076696
male0.040000
control0.009183
LOWER IN control0.008929
adult0.008547
homo sapiens0.005479
feces0.004739
Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN sweden0.333333
LOWER IN kingdom of spain0.333333
gay0.250000
LOWER IN gay0.250000
LOWER IN heterosexual0.200000
LOWER IN msw0.200000
heterosexual0.200000
msw0.200000
LOWER IN homosexual0.200000
LOWER IN msm0.200000
homosexual0.125000
msm0.125000
LOWER IN hiv infection0.111111
hiv infection0.090909
sweden0.062500
kingdom of spain0.040000
male0.020408
LOWER IN control0.004762
control0.004651
adult0.004292
homo sapiens0.002747
feces0.002375
Fraction of annotations for the query sequences containing the term
TermScore
feces1.000000
homo sapiens1.000000
adult1.000000
male1.000000
kingdom of spain0.928571
sweden0.928571
gay0.642857
homosexual0.642857
msm0.642857
hiv infection0.642857
heterosexual0.357143
msw0.357143
control0.357143
LOWER IN heterosexual0.071429
LOWER IN msw0.071429
LOWER IN gay0.071429
LOWER IN homosexual0.071429
LOWER IN msm0.071429
LOWER IN sweden0.071429
LOWER IN kingdom of spain0.071429
LOWER IN hiv infection0.071429
LOWER IN control0.071429
Number of experiments associating the term to the sequence
TermScore
gay1.000000
homosexual1.000000
msm1.000000
LOWER IN heterosexual1.000000
LOWER IN msw1.000000
feces1.000000
homo sapiens1.000000
hiv infection1.000000
adult1.000000
kingdom of spain1.000000
sweden1.000000
male1.000000
heterosexual1.000000
msw1.000000
LOWER IN gay1.000000
LOWER IN homosexual1.000000
LOWER IN msm1.000000
LOWER IN sweden1.000000
control1.000000
LOWER IN kingdom of spain1.000000
LOWER IN hiv infection1.000000
LOWER IN control1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
578amnon high in hiv infection compared to control in feces homo sapiens adult kingdom of spain sweden gay homosexual msm male 2020-01-14v31 / 1approvedNo
578amnondominant feces, homo sapiens, hiv infection, adult, kingdom of spain, sweden, gay, homosexual, msm, male2020-01-14v31 / 12approvedNo
578amnondominant feces, homo sapiens, control, adult, kingdom of spain, sweden, gay, homosexual, msm, male2020-01-14v31 / 13approvedNo
578amnondominant feces, homo sapiens, hiv infection, adult, kingdom of spain, sweden, heterosexual, msw, male2020-01-14v31 / 20approvedNo
578amnondominant feces, homo sapiens, control, adult, kingdom of spain, sweden, heterosexual, msw, male2020-01-14v31 / 26approvedNo
578amnon high in control compared to hiv infection in feces homo sapiens adult kingdom of spain sweden gay homosexual msm male 2020-01-14v31 / 32approvedNo
578amnoncommon feces, homo sapiens, hiv infection, adult, kingdom of spain, sweden, heterosexual, msw, male2020-01-14v31 / 53approvedNo
578amnon high in sweden compared to kingdom of spain in feces homo sapiens hiv infection adult gay homosexual msm male 2020-01-14v31 / 55approvedNo
578amnoncommon feces, homo sapiens, hiv infection, adult, kingdom of spain, sweden, gay, homosexual, msm, male2020-01-14v31 / 74approvedNo
578amnoncommon feces, homo sapiens, control, adult, kingdom of spain, sweden, heterosexual, msw, male2020-01-14v31 / 92approvedNo
578amnoncommon feces, homo sapiens, control, adult, kingdom of spain, sweden, gay, homosexual, msm, male2020-01-14v31 / 132approvedNo
578amnon high in kingdom of spain compared to sweden in feces homo sapiens hiv infection adult gay homosexual msm male 2020-01-14v31 / 133approvedNo
578amnonlower in gay (msm) individuals compared to heterosexual (msw) ( high in heterosexual msw compared to gay homosexual msm in feces homo sapiens hiv infection adult kingdom of spain sweden male )2020-01-14v31 / 220approvedNo
578amnonhigher in gay (msm) individuals compared to heterosexual (msw) ( high in gay homosexual msm compared to heterosexual msw in feces homo sapiens hiv infection adult kingdom of spain sweden male )2020-01-14v31 / 519approvedNo

Problems / suggestions? Please visit the dbBact forum