dbBact

Experiment ID: 580

Field	Description
name	progesterone increases bifidobacterium relative abundance during late pregnancy
sra	prjeb31104
doi	https://doi.org/10.1016/j.celrep.2019.03.075
datamd5	0bc4974dfd5ff4b71ec4f0ac42c3cd99
mapmd5	ab1d30644a44cff737c5110819ec0e68

Annotations for experiment:

term enrichment score

Term	Score
first trimester pregnancy stage	0.333333
third trimester pregnancy stage	0.333333
pregnancy	0.125000
israel	0.095238
female	0.025000
adult	0.008264
homo sapiens	0.005277
feces	0.004598

Fraction of dbbact annotations with this term covered by the query

Term	Score
first trimester pregnancy stage	0.250000
third trimester pregnancy stage	0.250000
pregnancy	0.066667
israel	0.050000
female	0.012658
adult	0.004149
homo sapiens	0.002646
feces	0.002304

Fraction of annotations for the query sequences containing the term

Term	Score
feces	1.000000
homo sapiens	1.000000
female	1.000000
pregnancy	1.000000
adult	1.000000
israel	1.000000
first trimester pregnancy stage	0.500000
third trimester pregnancy stage	0.500000

Number of experiments associating the term to the sequence

Term	Score
feces	1.000000
homo sapiens	1.000000
female	1.000000
pregnancy	1.000000
adult	1.000000
israel	1.000000
first trimester pregnancy stage	1.000000
third trimester pregnancy stage	1.000000

Exp. ID	User ID	Description	Date	Region	Sequences	Status	Flag
580	amnon	dominant feces, homo sapiens, female, pregnancy, adult, israel, first trimester pregnancy stage	2020-01-14	v4	1 / 24	approved	No
580	amnon	dominant feces, homo sapiens, female, pregnancy, adult, israel, third trimester pregnancy stage	2020-01-14	v4	1 / 25	approved	No
580	amnon	common feces, homo sapiens, female, pregnancy, adult, israel, third trimester pregnancy stage	2020-01-14	v4	1 / 103	approved	No
580	amnon	common feces, homo sapiens, female, pregnancy, adult, israel, first trimester pregnancy stage	2020-01-14	v4	1 / 112	approved	No

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