dbBact

Experiment ID: 599

Field	Description
name	a microbiome analysis of equine peripheral dental caries using next generation sequencing
sra	prjna526325
doi	doi: 10.1111/evj.13126
datamd5	aacd51c677df5d2755d79449e65fda0c
mapmd5	f0cf6889ea979fa08e4700b4d5e8abba

Annotations for experiment:

term enrichment score

Term	Score
edinburgh	0.666667
caudal teeth	0.500000
LOWER IN rostral teeth	0.500000
scotland	0.400000
horse	0.181818
equus caballus	0.166667
dentition	0.076923
farm	0.045455

Fraction of dbbact annotations with this term covered by the query

Term	Score
edinburgh	0.500000
caudal teeth	0.500000
LOWER IN rostral teeth	0.500000
scotland	0.250000
horse	0.100000
equus caballus	0.090909
dentition	0.040000
farm	0.023256

Fraction of annotations for the query sequences containing the term

Term	Score
farm	1.000000
dentition	1.000000
equus caballus	1.000000
scotland	1.000000
horse	1.000000
edinburgh	1.000000
caudal teeth	0.500000
LOWER IN rostral teeth	0.500000

Number of experiments associating the term to the sequence

Term	Score
farm	1.000000
dentition	1.000000
equus caballus	1.000000
scotland	1.000000
horse	1.000000
edinburgh	1.000000
caudal teeth	1.000000
LOWER IN rostral teeth	1.000000

Exp. ID	User ID	Description	Date	Region	Sequences	Status	Flag
599	amnon	high in caudal teeth compared to rostral teeth in farm dentition equus caballus scotland horse edinburgh	2020-03-25	v4	1 / 1	approved	No
599	amnon	high in caudal teeth compared to rostral teeth in farm dentition equus caballus scotland horse edinburgh	2020-03-25	v4	1 / 8	approved	No
599	amnon	dominant farm, dentition, equus caballus, scotland, horse, edinburgh	2020-03-25	v4	1 / 19	approved	No
599	amnon	common farm, dentition, equus caballus, scotland, horse, edinburgh	2020-03-25	v4	1 / 19	approved	No

Problems / suggestions? Please visit the dbBact forum