dbBact

Experiment ID: 601

Field	Description
name	implication of the gut microbiome composition of type 2 diabetic patients from northern china
sra	erp107659
doi	https://doi.org/10.1038/s41598-020-62224-3
datamd5	1ed9c30c6684127fc80ff717e7653f47
mapmd5	b71ac8c177830010d7d7432574e04d46

Annotations for experiment:

term enrichment score

Term	Score
type 2 diabetes mellitus	0.250000
LOWER IN type 2 diabetes mellitus	0.181818
china	0.009524
LOWER IN control	0.009009
control	0.008969
adult	0.008264
homo sapiens	0.005277
feces	0.004598

Fraction of dbbact annotations with this term covered by the query

Term	Score
LOWER IN type 2 diabetes mellitus	0.200000
type 2 diabetes mellitus	0.166667
china	0.004785
LOWER IN control	0.004630
control	0.004525
adult	0.004149
homo sapiens	0.002646
feces	0.002304

Fraction of annotations for the query sequences containing the term

Term	Score
feces	1.000000
homo sapiens	1.000000
adult	1.000000
china	1.000000
control	0.500000
type 2 diabetes mellitus	0.500000
LOWER IN control	0.166667
LOWER IN type 2 diabetes mellitus	0.166667

Number of experiments associating the term to the sequence

Term	Score
feces	1.000000
homo sapiens	1.000000
control	1.000000
adult	1.000000
china	1.000000
type 2 diabetes mellitus	1.000000
LOWER IN control	1.000000
LOWER IN type 2 diabetes mellitus	1.000000

Exp. ID	User ID	Description	Date	Region	Sequences	Status	Flag
601	amnon	high in control compared to type 2 diabetes mellitus in feces homo sapiens adult china	2020-03-30	v4	1 / 20	approved	No
601	amnon	dominant feces, homo sapiens, adult, type 2 diabetes mellitus, china	2020-03-30	v4	1 / 23	approved	No
601	amnon	high in type 2 diabetes mellitus compared to control in feces homo sapiens adult china	2020-03-30	v4	1 / 24	approved	No
601	amnon	dominant feces, homo sapiens, control, adult, china	2020-03-30	v4	1 / 27	approved	No
601	amnon	common feces, homo sapiens, adult, type 2 diabetes mellitus, china	2020-03-30	v4	1 / 85	approved	No
601	amnon	common feces, homo sapiens, control, adult, china	2020-03-30	v4	1 / 93	approved	No

Problems / suggestions? Please visit the dbBact forum