Experiment ID: 607

Field Description
namethe nasal and gut microbiome in parkinson's disease and idiopathic rapid eye movement sleep behavior disorder.
sraprjna381395
doi10.1002/mds.27105
datamd5fc5e56148195d0eed9e429b7e06c0d39
mapmd5fd835052624e392c69f4ba9a361d4143

Annotations for experiment:

term enrichment score
TermScore
nasal wash0.484848
rem sleep behavior disorder0.370370
parkinson's disease0.255319
nasopharynx0.168224
LOWER IN parkinson's disease0.160000
LOWER IN rem sleep behavior disorder0.105263
germany0.076923
control0.009181
LOWER IN control0.009153
homo sapiens0.005525
feces0.004760
Fraction of dbbact annotations with this term covered by the query
TermScore
rem sleep behavior disorder0.500000
nasal wash0.500000
LOWER IN rem sleep behavior disorder0.500000
LOWER IN parkinson's disease0.250000
parkinson's disease0.200000
nasopharynx0.100000
germany0.040000
LOWER IN control0.004762
control0.004651
homo sapiens0.002770
feces0.002392
Fraction of annotations for the query sequences containing the term
TermScore
homo sapiens1.000000
germany1.000000
nasopharynx0.529412
feces0.470588
nasal wash0.470588
control0.352941
parkinson's disease0.352941
rem sleep behavior disorder0.294118
LOWER IN control0.117647
LOWER IN parkinson's disease0.117647
contamination0.058824
LOWER IN rem sleep behavior disorder0.058824
Number of experiments associating the term to the sequence
TermScore
feces1.000000
homo sapiens1.000000
germany1.000000
rem sleep behavior disorder1.000000
control1.000000
parkinson's disease1.000000
nasopharynx1.000000
nasal wash1.000000
contamination1.000000
LOWER IN control1.000000
LOWER IN rem sleep behavior disorder1.000000
LOWER IN parkinson's disease1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
607amnon high in control compared to parkinson's disease in homo sapiens nasopharynx germany nasal wash 2020-04-19v41 / 1approvedNo
607amnon high in rem sleep behavior disorder parkinson's disease compared to control in feces homo sapiens germany 2020-04-19v41 / 3approvedNo
607amnon high in control compared to rem sleep behavior disorder parkinson's disease in feces homo sapiens germany 2020-04-19v41 / 4approvedNo
607amnon high in parkinson's disease compared to control in homo sapiens nasopharynx germany nasal wash 2020-04-19v41 / 5approvedNo
607amnonhigher in blanks compared to nasopharyngeal samples (contamination)2020-04-19v41 / 9approvedNo
607amnondominant homo sapiens, nasopharynx, germany, parkinson's disease, nasal wash2020-04-19v41 / 16approvedNo
607amnondominant feces, homo sapiens, control, germany2020-04-19v41 / 17approvedNo
607amnondominant homo sapiens, control, nasopharynx, germany, nasal wash2020-04-19v41 / 17approvedNo
607amnoncommon homo sapiens, control, nasopharynx, germany, nasal wash2020-04-19v41 / 17approvedNo
607amnondominant feces, homo sapiens, germany, parkinson's disease2020-04-19v41 / 18approvedNo
607amnondominant homo sapiens, nasopharynx, germany, rem sleep behavior disorder, nasal wash2020-04-19v41 / 18approvedNo
607amnoncommon homo sapiens, nasopharynx, germany, parkinson's disease, nasal wash2020-04-19v41 / 19approvedNo
607amnondominant feces, homo sapiens, germany, rem sleep behavior disorder2020-04-19v41 / 21approvedNo
607amnoncommon homo sapiens, nasopharynx, germany, rem sleep behavior disorder, nasal wash2020-04-19v41 / 25approvedNo
607amnoncommon feces, homo sapiens, germany, parkinson's disease2020-04-19v41 / 125approvedNo
607amnoncommon feces, homo sapiens, control, germany2020-04-19v41 / 128approvedNo
607amnoncommon feces, homo sapiens, germany, rem sleep behavior disorder2020-04-19v41 / 134approvedNo

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