dbBact

Experiment ID: 639

Field	Description
name	uncovering the microbiome of invasive sympatric european brown hares and european rabbits in australia
sra	prjna576096
doi	https://doi.org/10.7717/peerj.9564
datamd5	80e2fe6c76d6f73f4f63b8d4b9dfdb00
mapmd5	43e2cbb5c3b7dc1c40e8782cf9cd2d6c

Annotations for experiment:

term enrichment score

Term	Score
nature reserve	0.666667
european brown hare	0.500000
european rabbit	0.400000
lepus europaeus	0.333333
LOWER IN lepus europaeus	0.250000
LOWER IN european brown hare	0.250000
LOWER IN oryctolagus cuniculus	0.250000
LOWER IN european rabbit	0.250000
oryctolagus cuniculus	0.181818
australia	0.062500
wild	0.054054
adult	0.008264
feces	0.004619

Fraction of dbbact annotations with this term covered by the query

Term	Score
LOWER IN lepus europaeus	0.500000
LOWER IN european brown hare	0.500000
nature reserve	0.500000
european brown hare	0.500000
LOWER IN oryctolagus cuniculus	0.500000
LOWER IN european rabbit	0.500000
european rabbit	0.333333
lepus europaeus	0.250000
oryctolagus cuniculus	0.111111
australia	0.032258
wild	0.027778
adult	0.004149
feces	0.002315

Fraction of annotations for the query sequences containing the term

Term	Score
feces	1.000000
nature reserve	1.000000
adult	1.000000
australia	1.000000
wild	1.000000
oryctolagus cuniculus	0.500000
european rabbit	0.500000
lepus europaeus	0.500000
european brown hare	0.500000
LOWER IN lepus europaeus	0.166667
LOWER IN european brown hare	0.166667
LOWER IN oryctolagus cuniculus	0.166667
LOWER IN european rabbit	0.166667

Number of experiments associating the term to the sequence

Term	Score
oryctolagus cuniculus	1.000000
european rabbit	1.000000
LOWER IN lepus europaeus	1.000000
LOWER IN european brown hare	1.000000
feces	1.000000
nature reserve	1.000000
adult	1.000000
australia	1.000000
wild	1.000000
lepus europaeus	1.000000
european brown hare	1.000000
LOWER IN oryctolagus cuniculus	1.000000
LOWER IN european rabbit	1.000000

Exp. ID	User ID	Description	Date	Region	Sequences	Status	Flag
639	amnon	dominant feces, nature reserve, adult, oryctolagus cuniculus, australia, european rabbit, wild	2020-08-21	v3	1 / 17	approved	No
639	amnon	dominant feces, nature reserve, adult, australia, lepus europaeus, european brown hare, wild	2020-08-21	v3	1 / 20	approved	No
639	amnon	common feces, nature reserve, adult, australia, lepus europaeus, european brown hare, wild	2020-08-21	v3	1 / 182	approved	No
639	amnon	high in lepus europaeus european brown hare compared to oryctolagus cuniculus european rabbit in feces nature reserve adult australia wild	2020-08-21	v3	1 / 235	approved	No
639	amnon	common feces, nature reserve, adult, oryctolagus cuniculus, australia, european rabbit, wild	2020-08-21	v3	1 / 280	approved	No
639	amnon	high in oryctolagus cuniculus european rabbit compared to lepus europaeus european brown hare in feces nature reserve adult australia wild	2020-08-21	v3	1 / 480	approved	No

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