dbBact

Experiment ID: 669

Field	Description
name	fecal microbiome and metabolome of infants fed bovine mfgm supplemented formula or standard formula with breast-fed infants as reference: a randomized controlled trial
qiita	12021
sra	erp112481
doi	https://doi.org/10.1038/s41598-019-47953-4
datamd5	7fee88720b227baaf7d9cc7ad36325e1
mapmd5	cae44c0844aeed123d8e6eb857b439d9

Annotations for experiment:

term enrichment score

Term	Score
2-month-old human stage	0.285714
14-days-old human	0.250000
LOWER IN 2-month-old human stage	0.222222
12-month-old human stage	0.200000
LOWER IN 12-month-old human stage	0.166667
sweden	0.117647
infant	0.052632
homo sapiens	0.005277
feces	0.004598

Fraction of dbbact annotations with this term covered by the query

Term	Score
14-days-old human	0.500000
LOWER IN 2-month-old human stage	0.333333
2-month-old human stage	0.250000
LOWER IN 12-month-old human stage	0.166667
12-month-old human stage	0.125000
sweden	0.062500
infant	0.027027
homo sapiens	0.002646
feces	0.002304

Fraction of annotations for the query sequences containing the term

Term	Score
feces	1.000000
homo sapiens	1.000000
infant	1.000000
sweden	1.000000
12-month-old human stage	0.500000
2-month-old human stage	0.333333
LOWER IN 2-month-old human stage	0.166667
14-days-old human	0.166667
LOWER IN 12-month-old human stage	0.166667

Number of experiments associating the term to the sequence

Term	Score
12-month-old human stage	1.000000
LOWER IN 2-month-old human stage	1.000000
feces	1.000000
homo sapiens	1.000000
infant	1.000000
sweden	1.000000
14-days-old human	1.000000
LOWER IN 12-month-old human stage	1.000000
2-month-old human stage	1.000000

Exp. ID	User ID	Description	Date	Region	Sequences	Status	Flag
669	amnon	common feces, homo sapiens, infant, sweden, 2-month-old human stage	2020-09-26	v4	1 / 12	approved	No
669	amnon	dominant feces, homo sapiens, infant, sweden, 2-month-old human stage	2020-09-26	v4	1 / 13	approved	No
669	amnon	dominant feces, homo sapiens, infant, sweden, 12-month-old human stage	2020-09-26	v4	1 / 23	approved	No
669	amnon	high in 14-days-old human compared to 12-month-old human stage in feces homo sapiens infant sweden	2020-09-26	v4	1 / 33	approved	No
669	amnon	common feces, homo sapiens, infant, sweden, 12-month-old human stage	2020-09-26	v4	1 / 35	approved	No
669	amnon	high in 12-month-old human stage compared to 2-month-old human stage in feces homo sapiens infant sweden	2020-09-26	v4	1 / 212	approved	No

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