Experiment ID: 671

Field Description
namematuration of the infant rhesus macaque gut microbiome and its role in the development of diarrheal disease
sraprjna546004
doihttps://doi.org/10.1186/s13059-019-1789-x
datamd58cddf79ccc74191a0cb33714744ddfa9
mapmd5179be4453a51ed6c0a825b4db306bea2

Annotations for experiment:

Fraction of dbbact annotations with this term covered by the query
TermScore
age 8 months0.500000
LOWER IN age 6 months0.500000
LOWER IN age 8 months0.500000
LOWER IN age 1 month0.500000
LOWER IN state of california0.500000
LOWER IN state of oregon0.500000
rhesus macaque0.333333
age 1 month0.333333
age 6 months0.333333
LOWER IN 3-month-old human stage0.166667
3-month-old human stage0.142857
state of oregon0.142857
macaca mulatta0.125000
monkey0.055556
LOWER IN adult0.040000
LOWER IN female0.035714
captive0.032258
state of california0.032258
female0.012987
research facility0.005405
adult0.004329
united states of america0.003436
feces0.002387
Fraction of annotations for the query sequences containing the term
TermScore
feces1.000000
united states of america1.000000
research facility1.000000
macaca mulatta1.000000
monkey1.000000
captive1.000000
rhesus macaque1.000000
age 8 months0.250000
3-month-old human stage0.250000
female0.208333
adult0.208333
age 1 month0.208333
state of oregon0.166667
LOWER IN state of california0.166667
state of california0.166667
LOWER IN state of oregon0.166667
age 6 months0.125000
LOWER IN 3-month-old human stage0.083333
LOWER IN age 8 months0.083333
LOWER IN age 6 months0.041667
LOWER IN age 1 month0.041667
LOWER IN female0.041667
LOWER IN adult0.041667
Number of experiments associating the term to the sequence
TermScore
age 8 months1.000000
LOWER IN age 6 months1.000000
LOWER IN 3-month-old human stage1.000000
feces1.000000
united states of america1.000000
research facility1.000000
macaca mulatta1.000000
monkey1.000000
captive1.000000
rhesus macaque1.000000
female1.000000
adult1.000000
LOWER IN age 8 months1.000000
3-month-old human stage1.000000
LOWER IN age 1 month1.000000
state of oregon1.000000
LOWER IN state of california1.000000
state of california1.000000
LOWER IN state of oregon1.000000
age 1 month1.000000
LOWER IN female1.000000
LOWER IN adult1.000000
age 6 months1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
671amnondominant feces, united states of america, female, research facility, adult, macaca mulatta, monkey, captive, rhesus macaque2020-09-27v41 / 15approvedNo
671amnondominant feces, united states of america, research facility, macaca mulatta, monkey, age 6 months, captive, rhesus macaque2020-09-27v41 / 18approvedNo
671amnondominant feces, united states of america, research facility, macaca mulatta, monkey, captive, rhesus macaque, age 8 months2020-09-27v41 / 19approvedNo
671amnondominant feces, united states of america, research facility, macaca mulatta, age 1 month, monkey, captive, rhesus macaque2020-09-27v41 / 20approvedNo
671amnondominant feces, united states of america, research facility, macaca mulatta, monkey, captive, rhesus macaque, 3-month-old human stage2020-09-27v41 / 21approvedNo
671amnon high in state of oregon compared to state of california in feces united states of america research facility macaca mulatta monkey captive rhesus macaque 3-month-old human stage 2020-09-27v41 / 38approvedNo
671amnon high in state of california compared to state of oregon in feces united states of america research facility macaca mulatta monkey captive rhesus macaque 3-month-old human stage 2020-09-27v41 / 52approvedNo
671amnon high in age 1 month compared to 3-month-old human stage in feces united states of america research facility macaca mulatta monkey captive rhesus macaque 2020-09-28v41 / 64approvedNo
671amnon high in state of california compared to state of oregon in feces united states of america research facility macaca mulatta monkey captive rhesus macaque age 8 months 2020-09-27v41 / 66approvedNo
671amnon high in age 6 months 3-month-old human stage compared to age 8 months in feces united states of america research facility macaca mulatta monkey captive rhesus macaque 2020-09-28v41 / 79approvedNo
671amnoncommon feces, united states of america, research facility, macaca mulatta, age 1 month, monkey, captive, rhesus macaque2020-09-27v41 / 81approvedNo
671amnoncommon feces, united states of america, research facility, macaca mulatta, monkey, age 6 months, captive, rhesus macaque2020-09-27v41 / 117approvedNo
671amnon high in state of oregon compared to state of california in feces united states of america research facility macaca mulatta age 1 month monkey captive rhesus macaque 2020-09-27v41 / 140approvedNo
671amnoncommon feces, united states of america, research facility, macaca mulatta, monkey, captive, rhesus macaque, 3-month-old human stage2020-09-27v41 / 170approvedNo
671amnon high in age 8 months compared to female adult in feces united states of america research facility macaca mulatta monkey captive rhesus macaque 2020-09-27v41 / 182approvedNo
671amnon high in state of california compared to state of oregon in feces united states of america research facility macaca mulatta age 1 month monkey captive rhesus macaque 2020-09-27v41 / 217approvedNo
671amnon high in state of oregon compared to state of california in feces united states of america research facility macaca mulatta monkey captive rhesus macaque age 8 months 2020-09-27v41 / 232approvedNo
671amnoncommon feces, united states of america, research facility, macaca mulatta, monkey, captive, rhesus macaque, age 8 months2020-09-27v41 / 252approvedNo
671amnon high in state of california compared to state of oregon in feces united states of america female research facility adult macaca mulatta monkey captive rhesus macaque 2020-09-27v41 / 355approvedNo
671amnoncommon feces, united states of america, female, research facility, adult, macaca mulatta, monkey, captive, rhesus macaque2020-09-27v41 / 356approvedNo
671amnon high in state of oregon compared to state of california in feces united states of america female research facility adult macaca mulatta monkey captive rhesus macaque 2020-09-27v41 / 534approvedNo
671amnon high in 3-month-old human stage compared to age 1 month in feces united states of america research facility macaca mulatta monkey captive rhesus macaque 2020-09-28v41 / 714approvedNo
671amnon high in female adult compared to age 8 months in feces united states of america research facility macaca mulatta monkey captive rhesus macaque 2020-09-27v41 / 947approvedNo
671amnon high in age 8 months compared to age 6 months 3-month-old human stage in feces united states of america research facility macaca mulatta monkey captive rhesus macaque 2020-09-28v41 / 955approvedNo

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