Experiment ID: 683

Field Description
nameantibiotics-driven gut microbiome perturbation alters immunity to vaccines in humans
sraprjna505336
doihttps://doi.org/10.1016/j.cell.2019.08.010
datamd51023c166accf1dd7f41fad925fd5a533
mapmd53829d2d53e477c35ae9ee5684321b6db

Annotations for experiment:

term enrichment score
TermScore
vancomycin0.333333
neomycin0.333333
metronidazole0.250000
LOWER IN neomycin0.222222
LOWER IN vancomycin0.181818
LOWER IN metronidazole0.153846
antibiotic0.090909
LOWER IN antibiotic0.083333
state of california0.060606
LOWER IN control0.009259
control0.009050
adult0.008547
united states of america0.006757
homo sapiens0.005479
feces0.004739
Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN neomycin0.333333
vancomycin0.250000
neomycin0.250000
LOWER IN vancomycin0.200000
metronidazole0.166667
LOWER IN metronidazole0.142857
LOWER IN antibiotic0.055556
antibiotic0.050000
state of california0.031250
LOWER IN control0.004762
control0.004651
adult0.004292
united states of america0.003390
homo sapiens0.002747
feces0.002375
Fraction of annotations for the query sequences containing the term
TermScore
feces1.000000
homo sapiens1.000000
united states of america1.000000
adult1.000000
state of california1.000000
antibiotic0.500000
vancomycin0.500000
metronidazole0.500000
neomycin0.500000
control0.166667
LOWER IN antibiotic0.166667
LOWER IN vancomycin0.166667
LOWER IN metronidazole0.166667
LOWER IN neomycin0.166667
LOWER IN control0.166667
Number of experiments associating the term to the sequence
TermScore
control1.000000
LOWER IN antibiotic1.000000
LOWER IN vancomycin1.000000
LOWER IN metronidazole1.000000
LOWER IN neomycin1.000000
feces1.000000
homo sapiens1.000000
united states of america1.000000
adult1.000000
state of california1.000000
antibiotic1.000000
vancomycin1.000000
metronidazole1.000000
neomycin1.000000
LOWER IN control1.000000

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