dbBact

Experiment ID: 690

Field	Description
name	increasing dietary fiber intake is associated with a distinct esophageal microbiome
sra	srp141237
sra	prjna451033
doi	https://dx.doi.org/10.1038%2fs41424-018-0067-7
datamd5	14a6d87f19613813567392f122e2eda9
mapmd5	aee87f79e44b8acdcad7bb1052822435

Annotations for experiment:

term enrichment score

Term	Score
squamous esophagus	0.666667
esophageal disease	0.500000
esophagus	0.400000
new york city	0.250000
hospital	0.181818
united states of america	0.006689
homo sapiens	0.005319

Fraction of dbbact annotations with this term covered by the query

Term	Score
squamous esophagus	0.500000
esophageal disease	0.333333
esophagus	0.250000
new york city	0.142857
hospital	0.100000
united states of america	0.003356
homo sapiens	0.002667

Fraction of annotations for the query sequences containing the term

Term	Score
homo sapiens	1.000000
united states of america	1.000000
hospital	1.000000
esophagus	1.000000
new york city	1.000000
esophageal disease	1.000000
squamous esophagus	1.000000

Number of experiments associating the term to the sequence

Term	Score
homo sapiens	1.000000
united states of america	1.000000
hospital	1.000000
esophagus	1.000000
new york city	1.000000
esophageal disease	1.000000
squamous esophagus	1.000000

Exp. ID	User ID	Description	Date	Region	Sequences	Status	Flag
690	amnon	dominant in squamous esophagos samples from patients undergoing endoscopy (dominant homo sapiens, united states of america, hospital, esophagus, new york city, esophageal disease, squamous esophagus)	2028-03-11	v4	1 / 15	approved	No
690	amnon	common in squamous esophagos samples from patients undergoing endoscopy (common homo sapiens, united states of america, hospital, esophagus, new york city, esophageal disease, squamous esophagus)	2028-03-11	v4	1 / 68	approved	No

Problems / suggestions? Please visit the dbBact forum