dbBact

Experiment ID: 693

Field	Description
name	alterations in gut microbiome composition and barrier function are associated with reproductive and metabolic defects in women with polycystic ovary syndrome (pcos): a pilot study
sra	srp077213
sra	prjna326866
doi	https://doi.org/10.1371/journal.pone.0168390
datamd5	4796f3b111db364213f9d8508cff4f89
mapmd5	cff047fec99149a55bb418bc84f76a74

Annotations for experiment:

term enrichment score

Term	Score
graz city district	0.400000
polycystic ovary syndrome	0.333333
LOWER IN polycystic ovary syndrome	0.285714
austria	0.181818
female	0.025000
LOWER IN control	0.009091
control	0.008889
adult	0.008264
homo sapiens	0.005277
feces	0.004598

Fraction of dbbact annotations with this term covered by the query

Term	Score
polycystic ovary syndrome	0.500000
LOWER IN polycystic ovary syndrome	0.333333
graz city district	0.250000
austria	0.100000
female	0.012658
LOWER IN control	0.004630
control	0.004525
adult	0.004149
homo sapiens	0.002646
feces	0.002304

Fraction of annotations for the query sequences containing the term

Term	Score
feces	1.000000
homo sapiens	1.000000
female	1.000000
adult	1.000000
austria	1.000000
graz city district	1.000000
polycystic ovary syndrome	0.250000
LOWER IN control	0.250000
control	0.250000
LOWER IN polycystic ovary syndrome	0.250000

Number of experiments associating the term to the sequence

Term	Score
feces	1.000000
homo sapiens	1.000000
female	1.000000
adult	1.000000
austria	1.000000
graz city district	1.000000
polycystic ovary syndrome	1.000000
LOWER IN control	1.000000
control	1.000000
LOWER IN polycystic ovary syndrome	1.000000

Exp. ID	User ID	Description	Date	Region	Sequences	Status	Flag
693	amnon	high in control compared to polycystic ovary syndrome in feces homo sapiens female adult austria graz city district	2028-03-16	v1	1 / 9	approved	No
693	amnon	dominant feces, homo sapiens, female, adult, austria, graz city district	2028-03-16	v1	1 / 14	approved	No
693	amnon	high in polycystic ovary syndrome compared to control in feces homo sapiens female adult austria graz city district	2028-03-16	v1	1 / 29	approved	No
693	amnon	common feces, homo sapiens, female, adult, austria, graz city district	2028-03-16	v1	1 / 104	approved	No

Problems / suggestions? Please visit the dbBact forum