dbBact

Experiment ID: 71

Field	Description
name	physiological and microbial adjustments to diet quality permit facultative herbivory in an omnivorous lizard
sra	srp062680
datamd5	68c10e566e716057b3f714c15f876aa2
mapmd5	faef587240485eb9d6977e961986e8f7

Annotations for experiment:

term enrichment score

Term	Score
liolaemus ruibali	0.666667
argentina	0.333333
small intestine	0.222222
hindgut	0.200000
LOWER IN mixed	0.142857
mixed	0.142857
LOWER IN hindgut	0.133333
high fiber	0.117647
LOWER IN small intestine	0.111111
LOWER IN high fiber	0.111111
stomach	0.100000
LOWER IN stomach	0.090909
colon	0.074074
LOWER IN colon	0.066667
diet	0.066667
LOWER IN feces	0.047619
research facility	0.010471
feces	0.004587

Fraction of dbbact annotations with this term covered by the query

Term	Score
liolaemus ruibali	0.500000
LOWER IN mixed	0.500000
mixed	0.500000
LOWER IN hindgut	0.333333
argentina	0.200000
high fiber	0.200000
hindgut	0.166667
LOWER IN small intestine	0.166667
small intestine	0.166667
LOWER IN high fiber	0.166667
LOWER IN stomach	0.100000
stomach	0.058824
LOWER IN colon	0.055556
colon	0.043478
diet	0.041667
LOWER IN feces	0.033333
research facility	0.005263
feces	0.002315

Fraction of annotations for the query sequences containing the term

Term	Score
research facility	1.000000
argentina	1.000000
liolaemus ruibali	1.000000
stomach	0.333333
small intestine	0.333333
feces	0.250000
hindgut	0.250000
colon	0.250000
diet	0.166667
LOWER IN stomach	0.083333
LOWER IN small intestine	0.083333
LOWER IN feces	0.083333
LOWER IN hindgut	0.083333
LOWER IN colon	0.083333
high fiber	0.083333
LOWER IN mixed	0.083333
mixed	0.083333
LOWER IN high fiber	0.083333

Number of experiments associating the term to the sequence

Term	Score
feces	1.000000
hindgut	1.000000
colon	1.000000
LOWER IN stomach	1.000000
LOWER IN small intestine	1.000000
research facility	1.000000
argentina	1.000000
liolaemus ruibali	1.000000
stomach	1.000000
small intestine	1.000000
LOWER IN feces	1.000000
LOWER IN hindgut	1.000000
LOWER IN colon	1.000000
diet	1.000000
high fiber	1.000000
LOWER IN mixed	1.000000
mixed	1.000000
LOWER IN high fiber	1.000000

Exp. ID	User ID	Description	Date	Region	Sequences	Status	Flag
71	amnon	higher in stomach in lizards eating mixed diet (plant+insects) compared to only plant diet ( high in diet mixed compared to high fiber in research facility stomach argentina liolaemus ruibali )	2017-02-25	v4	1 / 4	approved	No
71	amnon	higher in small intestine of lizards on plant only diet compared to mixed (plant+insects) ( high in diet high fiber compared to mixed in research facility small intestine argentina liolaemus ruibali )	2017-02-25	v4	1 / 8	approved	No
71	amnon	dominant research facility, small intestine, argentina, liolaemus ruibali	2017-02-25	v4	1 / 10	approved	No
71	amnon	dominant research facility, stomach, argentina, liolaemus ruibali	2017-02-25	v4	1 / 12	approved	No
71	amnon	dominant feces, research facility, argentina, liolaemus ruibali	2017-02-25	v4	1 / 17	approved	No
71	amnon	dominant research facility, hindgut, colon, argentina, liolaemus ruibali	2017-02-25	v4	1 / 23	approved	No
71	amnon	common research facility, small intestine, argentina, liolaemus ruibali	2017-02-25	v4	1 / 33	approved	No
71	amnon	high in stomach small intestine compared to feces hindgut colon in research facility argentina liolaemus ruibali	2017-02-25	v4	1 / 67	approved	No
71	amnon	common research facility, stomach, argentina, liolaemus ruibali	2017-02-25	v4	1 / 88	approved	No
71	amnon	common feces, research facility, argentina, liolaemus ruibali	2017-02-25	v4	1 / 113	approved	No
71	amnon	common research facility, hindgut, colon, argentina, liolaemus ruibali	2017-02-25	v4	1 / 144	approved	No
71	amnon	high in feces hindgut colon compared to stomach small intestine in research facility argentina liolaemus ruibali	2017-02-25	v4	1 / 255	approved	No

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