dbBact

Experiment ID: 740

Field	Description
name	no impact of a short-term climatic “el niño” fluctuation on gut microbial diversity in populations of the galápagos marine iguana (amblyrhynchus cristatus)
sra	prjna658812
doi	https://doi.org/10.1007/s00114-020-01714-w
datamd5	4853965c7c035f741dfdeba4f0716910
mapmd5	44744cd459aaf114804ef4016badc09c

Annotations for experiment:

term enrichment score

Term	Score
amblyrhynchus cristatus	0.666667
marine iguana	0.666667
galapagos islands	0.500000
alimentary part of gastrointestinal system	0.500000
cloacal swab	0.333333
ecuador	0.250000
low body condition index	0.250000
LOWER IN high body condition index	0.250000
high body condition index	0.250000
LOWER IN low body condition index	0.250000
cloaca	0.181818
LOWER IN male organism	0.166667
LOWER IN female organism	0.133333
male organism	0.086957
female organism	0.080000
LOWER IN male	0.064516
LOWER IN female	0.058824
male	0.037037
female	0.024096

Fraction of dbbact annotations with this term covered by the query

Term	Score
amblyrhynchus cristatus	0.500000
marine iguana	0.500000
low body condition index	0.500000
LOWER IN high body condition index	0.500000
high body condition index	0.500000
LOWER IN low body condition index	0.500000
galapagos islands	0.333333
alimentary part of gastrointestinal system	0.333333
cloacal swab	0.200000
LOWER IN male organism	0.166667
ecuador	0.142857
LOWER IN female organism	0.111111
cloaca	0.100000
male organism	0.058824
female organism	0.052632
LOWER IN male	0.040000
LOWER IN female	0.035714
male	0.020833
female	0.012987

Fraction of annotations for the query sequences containing the term

Term	Score
cloaca	1.000000
ecuador	1.000000
galapagos islands	1.000000
alimentary part of gastrointestinal system	1.000000
amblyrhynchus cristatus	1.000000
cloacal swab	1.000000
marine iguana	1.000000
female	0.166667
female organism	0.166667
LOWER IN male	0.166667
LOWER IN male organism	0.166667
low body condition index	0.166667
LOWER IN high body condition index	0.166667
high body condition index	0.166667
LOWER IN low body condition index	0.166667
male	0.166667
male organism	0.166667
LOWER IN female	0.166667
LOWER IN female organism	0.166667

Number of experiments associating the term to the sequence

Term	Score
cloaca	1.000000
ecuador	1.000000
galapagos islands	1.000000
alimentary part of gastrointestinal system	1.000000
amblyrhynchus cristatus	1.000000
cloacal swab	1.000000
marine iguana	1.000000
female	1.000000
female organism	1.000000
LOWER IN male	1.000000
LOWER IN male organism	1.000000
low body condition index	1.000000
LOWER IN high body condition index	1.000000
high body condition index	1.000000
LOWER IN low body condition index	1.000000
male	1.000000
male organism	1.000000
LOWER IN female	1.000000
LOWER IN female organism	1.000000

Exp. ID	User ID	Description	Date	Region	Sequences	Status	Flag
740	amnon	high in male male organism compared to female female organism in cloaca ecuador galapagos islands alimentary part of gastrointestinal system amblyrhynchus cristatus cloacal swab marine iguana	2021-02-08	v4	1 / 10	approved	No
740	amnon	dominant cloaca, ecuador, galapagos islands, alimentary part of gastrointestinal system, amblyrhynchus cristatus, cloacal swab, marine iguana	2021-02-08	v4	1 / 20	approved	No
740	amnon	high in high body condition index compared to low body condition index in cloaca ecuador galapagos islands alimentary part of gastrointestinal system amblyrhynchus cristatus cloacal swab marine iguana	2021-02-08	v4	1 / 21	approved	No
740	amnon	high in low body condition index compared to high body condition index in cloaca ecuador galapagos islands alimentary part of gastrointestinal system amblyrhynchus cristatus cloacal swab marine iguana	2021-02-08	v4	1 / 25	approved	No
740	amnon	high in female female organism compared to male male organism in cloaca ecuador galapagos islands alimentary part of gastrointestinal system amblyrhynchus cristatus cloacal swab marine iguana	2021-02-08	v4	1 / 31	approved	No
740	amnon	common cloaca, ecuador, galapagos islands, alimentary part of gastrointestinal system, amblyrhynchus cristatus, cloacal swab, marine iguana	2021-02-08	v4	1 / 110	approved	No

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