Experiment ID: 748

Field Description
nameinfluence of industry standard feeding frequencies on behavioral patterns and rumen and fecal bacterial communities in holstein and jersey cows
srasrp271418
doihttps://doi.org/10.1371/journal.pone.0248147
datamd5ae81c4ca7fa2ef62610ba3fecaeb035b
mapmd59bf26f537941bf0091bfbd52986eed9a

Annotations for experiment:

term enrichment score
TermScore
state of mississippi0.666667
jersey cow0.461538
holstein dairy cow0.315789
LOWER IN jersey cow0.222222
LOWER IN holstein dairy cow0.222222
ruminal fluid0.200000
cow0.153846
LOWER IN ruminal fluid0.117647
bos taurus0.100000
female organism0.100000
LOWER IN rumen0.095238
rumen0.074074
LOWER IN feces0.045455
research facility0.010695
united states of america0.006826
feces0.004728
Fraction of dbbact annotations with this term covered by the query
TermScore
state of mississippi0.500000
LOWER IN jersey cow0.500000
jersey cow0.500000
LOWER IN holstein dairy cow0.500000
LOWER IN ruminal fluid0.333333
holstein dairy cow0.250000
LOWER IN rumen0.142857
ruminal fluid0.125000
cow0.083333
bos taurus0.052632
female organism0.052632
rumen0.040000
LOWER IN feces0.033333
research facility0.005376
united states of america0.003425
feces0.002375
Fraction of annotations for the query sequences containing the term
TermScore
united states of america1.000000
research facility1.000000
bos taurus1.000000
cow1.000000
female organism1.000000
state of mississippi1.000000
rumen0.500000
ruminal fluid0.500000
feces0.500000
holstein dairy cow0.428571
jersey cow0.428571
LOWER IN jersey cow0.142857
LOWER IN holstein dairy cow0.142857
LOWER IN feces0.071429
LOWER IN rumen0.071429
LOWER IN ruminal fluid0.071429
Number of experiments associating the term to the sequence
TermScore
rumen1.000000
ruminal fluid1.000000
LOWER IN feces1.000000
united states of america1.000000
research facility1.000000
bos taurus1.000000
cow1.000000
female organism1.000000
state of mississippi1.000000
feces1.000000
LOWER IN rumen1.000000
LOWER IN ruminal fluid1.000000
holstein dairy cow1.000000
LOWER IN jersey cow1.000000
jersey cow1.000000
LOWER IN holstein dairy cow1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
748amnondominant feces, united states of america, research facility, bos taurus, cow, female organism, state of mississippi, jersey cow2021-03-10v41 / 13approvedNo
748amnondominant feces, united states of america, research facility, bos taurus, cow, female organism, state of mississippi, holstein dairy cow2021-03-10v41 / 13approvedNo
748amnondominant united states of america, research facility, rumen, bos taurus, cow, female organism, ruminal fluid, state of mississippi, jersey cow2021-03-10v41 / 14approvedNo
748amnondominant united states of america, research facility, rumen, bos taurus, cow, female organism, ruminal fluid, state of mississippi, holstein dairy cow2021-03-10v41 / 16approvedNo
748amnon high in jersey cow compared to holstein dairy cow in feces united states of america research facility bos taurus cow female organism state of mississippi 2021-03-10v41 / 308approvedNo
748amnon high in holstein dairy cow compared to jersey cow in feces united states of america research facility bos taurus cow female organism state of mississippi 2021-03-10v41 / 407approvedNo
748amnoncommon feces, united states of america, research facility, bos taurus, cow, female organism, state of mississippi, jersey cow2021-03-10v41 / 516approvedNo
748amnoncommon feces, united states of america, research facility, bos taurus, cow, female organism, state of mississippi, holstein dairy cow2021-03-10v41 / 577approvedNo
748amnon high in jersey cow compared to holstein dairy cow in united states of america research facility rumen bos taurus cow female organism ruminal fluid state of mississippi 2021-03-10v41 / 603approvedNo
748amnoncommon united states of america, research facility, rumen, bos taurus, cow, female organism, ruminal fluid, state of mississippi, holstein dairy cow2021-03-10v41 / 614approvedNo
748amnoncommon united states of america, research facility, rumen, bos taurus, cow, female organism, ruminal fluid, state of mississippi, jersey cow2021-03-10v41 / 632approvedNo
748amnon high in holstein dairy cow compared to jersey cow in united states of america research facility rumen bos taurus cow female organism ruminal fluid state of mississippi 2021-03-10v41 / 638approvedNo
748amnon high in feces compared to rumen ruminal fluid in united states of america research facility bos taurus cow female organism state of mississippi 2021-03-10v41 / 2467approvedNo
748amnon high in rumen ruminal fluid compared to feces in united states of america research facility bos taurus cow female organism state of mississippi 2021-03-10v41 / 2716approvedNo

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