dbBact

Experiment ID: 757

Field	Description
name	gut microbiome profiles and associated metabolic pathways in hiv-infected treatment-naïve patients
sra	prjna682416
doi	https://doi.org/10.3390/cells10020385
datamd5	958c547e8e3301234179d5000e8d5c1d
mapmd5	ae9fd5d0723cafed229293de80aceef6

Annotations for experiment:

term enrichment score

Term	Score
santa catarina state	0.666667
brazil	0.076923
LOWER IN male	0.068966
LOWER IN female	0.062500
male	0.037736
female	0.024691
adult	0.008511
homo sapiens	0.005450
feces	0.004728

Fraction of dbbact annotations with this term covered by the query

Term	Score
santa catarina state	0.500000
brazil	0.040000
LOWER IN male	0.040000
LOWER IN female	0.035714
male	0.020408
female	0.012987
adult	0.004274
homo sapiens	0.002732
feces	0.002370

Fraction of annotations for the query sequences containing the term

Term	Score
feces	1.000000
homo sapiens	1.000000
adult	1.000000
brazil	1.000000
santa catarina state	1.000000
male	0.250000
LOWER IN female	0.250000
female	0.250000
LOWER IN male	0.250000

Number of experiments associating the term to the sequence

Term	Score
feces	1.000000
homo sapiens	1.000000
adult	1.000000
brazil	1.000000
santa catarina state	1.000000
male	1.000000
LOWER IN female	1.000000
female	1.000000
LOWER IN male	1.000000

Exp. ID	User ID	Description	Date	Region	Sequences	Status	Flag
757	amnon	high in female compared to male in feces homo sapiens adult brazil santa catarina state	2021-03-28	v3	1 / 11	approved	No
757	amnon	dominant feces, homo sapiens, adult, brazil, santa catarina state	2021-03-28	v3	1 / 19	approved	No
757	amnon	high in male compared to female in feces homo sapiens adult brazil santa catarina state	2021-03-28	v3	1 / 44	approved	No
757	amnon	common feces, homo sapiens, adult, brazil, santa catarina state	2021-03-28	v3	1 / 67	approved	No

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