dbBact

Experiment ID: 757

Field	Description
name	gut microbiome profiles and associated metabolic pathways in hiv-infected treatment-naïve patients
sra	prjna682416
doi	https://doi.org/10.3390/cells10020385
datamd5	958c547e8e3301234179d5000e8d5c1d
mapmd5	ae9fd5d0723cafed229293de80aceef6

Annotations for experiment:

term enrichment score

Term	Score
santa catarina state	0.666667
brazil	0.076923
LOWER IN male	0.066667
LOWER IN female	0.060606
male	0.037037
female	0.023810
adult	0.008163
homo sapiens	0.005236
feces	0.004587

Fraction of dbbact annotations with this term covered by the query

Term	Score
santa catarina state	0.500000
brazil	0.040000
LOWER IN male	0.038462
LOWER IN female	0.034483
male	0.020000
female	0.012500
adult	0.004098
homo sapiens	0.002625
feces	0.002299

Fraction of annotations for the query sequences containing the term

Term	Score
feces	1.000000
homo sapiens	1.000000
adult	1.000000
brazil	1.000000
santa catarina state	1.000000
male	0.250000
LOWER IN female	0.250000
female	0.250000
LOWER IN male	0.250000

Number of experiments associating the term to the sequence

Term	Score
feces	1.000000
homo sapiens	1.000000
adult	1.000000
brazil	1.000000
santa catarina state	1.000000
male	1.000000
LOWER IN female	1.000000
female	1.000000
LOWER IN male	1.000000

Exp. ID	User ID	Description	Date	Region	Sequences	Status	Flag
757	amnon	high in female compared to male in feces homo sapiens adult brazil santa catarina state	2021-03-28	v3	1 / 11	approved	No
757	amnon	dominant feces, homo sapiens, adult, brazil, santa catarina state	2021-03-28	v3	1 / 19	approved	No
757	amnon	high in male compared to female in feces homo sapiens adult brazil santa catarina state	2021-03-28	v3	1 / 44	approved	No
757	amnon	common feces, homo sapiens, adult, brazil, santa catarina state	2021-03-28	v3	1 / 67	approved	No

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