dbBact

Experiment ID: 774

Field	Description
name	the human oral cavity microbiota composition during acute tonsillitis: a cross-sectional survey
sra	prjna559766
doi	https://doi.org/10.1186/s12903-019-0956-5
datamd5	820c59da204ed8f8bd6f41dcf9764b73
mapmd5	8d9d92aaa9d0e0a3ff22f6f989676e22

Annotations for experiment:

term enrichment score

Term	Score
hong kong	0.400000
tonsillitis	0.333333
oral wash	0.222222
LOWER IN tonsillitis	0.200000
oral cavity	0.095238
saliva	0.032787
LOWER IN control	0.009259
control	0.009217
adult	0.008621
homo sapiens	0.005510

Fraction of dbbact annotations with this term covered by the query

Term	Score
hong kong	0.250000
tonsillitis	0.250000
LOWER IN tonsillitis	0.250000
oral wash	0.125000
oral cavity	0.050000
saliva	0.016667
LOWER IN control	0.004762
control	0.004651
adult	0.004329
homo sapiens	0.002762

Fraction of annotations for the query sequences containing the term

Term	Score
homo sapiens	1.000000
saliva	1.000000
oral cavity	1.000000
adult	1.000000
hong kong	1.000000
oral wash	1.000000
control	0.500000
tonsillitis	0.500000
LOWER IN tonsillitis	0.166667
LOWER IN control	0.166667

Number of experiments associating the term to the sequence

Term	Score
homo sapiens	1.000000
control	1.000000
saliva	1.000000
oral cavity	1.000000
adult	1.000000
hong kong	1.000000
oral wash	1.000000
tonsillitis	1.000000
LOWER IN tonsillitis	1.000000
LOWER IN control	1.000000

Exp. ID	User ID	Description	Date	Region	Sequences	Status	Flag
774	amnon	dominant homo sapiens, control, saliva, oral cavity, adult, hong kong, oral wash	2021-04-24	v3	1 / 18	approved	No
774	amnon	dominant homo sapiens, saliva, oral cavity, adult, hong kong, oral wash, tonsillitis	2021-04-24	v3	1 / 19	approved	No
774	amnon	high in tonsillitis compared to control in homo sapiens saliva oral cavity adult hong kong oral wash	2021-04-24	v3	1 / 30	approved	No
774	amnon	high in control compared to tonsillitis in homo sapiens saliva oral cavity adult hong kong oral wash	2021-04-24	v3	1 / 55	approved	No
774	amnon	common homo sapiens, saliva, oral cavity, adult, hong kong, oral wash, tonsillitis	2021-04-24	v3	1 / 74	approved	No
774	amnon	common homo sapiens, control, saliva, oral cavity, adult, hong kong, oral wash	2021-04-24	v3	1 / 92	approved	No

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