dbBact

Experiment ID: 775

Field	Description
name	helicobacter pylori infection is correlated with the incidence of erosive oral lichen planus and the alteration of the oral microbiome composition
sra	prjna436183
doi	https://doi.org/10.1186/s12866-021-02188-0
datamd5	a6959d3d098c2d159269edcfae342268
mapmd5	f5d76deb73273fa7e21770b258c9f82d

Annotations for experiment:

term enrichment score

Term	Score
jinan city prefecture	0.666667
lichen planus	0.333333
LOWER IN lichen planus	0.333333
saliva	0.030769
china	0.009524
LOWER IN control	0.009091
control	0.008889
adult	0.008264
homo sapiens	0.005277

Fraction of dbbact annotations with this term covered by the query

Term	Score
jinan city prefecture	0.500000
lichen planus	0.500000
LOWER IN lichen planus	0.500000
saliva	0.015625
china	0.004785
LOWER IN control	0.004630
control	0.004525
adult	0.004149
homo sapiens	0.002646

Fraction of annotations for the query sequences containing the term

Term	Score
homo sapiens	1.000000
saliva	1.000000
adult	1.000000
china	1.000000
jinan city prefecture	1.000000
lichen planus	0.250000
LOWER IN control	0.250000
control	0.250000
LOWER IN lichen planus	0.250000

Number of experiments associating the term to the sequence

Term	Score
homo sapiens	1.000000
saliva	1.000000
adult	1.000000
china	1.000000
jinan city prefecture	1.000000
lichen planus	1.000000
LOWER IN control	1.000000
control	1.000000
LOWER IN lichen planus	1.000000

Exp. ID	User ID	Description	Date	Region	Sequences	Status	Flag
775	amnon	high in control compared to lichen planus in homo sapiens saliva adult china jinan city prefecture	2021-04-24	v4	1 / 9	approved	No
775	amnon	dominant homo sapiens, saliva, adult, china, jinan city prefecture	2021-04-24	v4	1 / 17	approved	No
775	amnon	high in lichen planus compared to control in homo sapiens saliva adult china jinan city prefecture	2021-04-24	v4	1 / 56	approved	No
775	amnon	common homo sapiens, saliva, adult, china, jinan city prefecture	2021-04-24	v4	1 / 133	approved	No

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