dbBact

Experiment ID: 778

Field	Description
name	multi-omics analysis to examine microbiota, host gene expression and metabolites in the intestine of black tiger shrimp (penaeus monodon) with different growth performance
sra	prjna553862
doi	https://doi.org/10.7717/peerj.9646
datamd5	bcb05f320f45953458464cfd0c4fd9a5
mapmd5	ac4cd4c74717478b47aea75833ac467e

Annotations for experiment:

term enrichment score

Term	Score
penaeus monodon	0.666667
black tiger shrimp	0.666667
decreased weight	0.333333
bottom weight group	0.333333
LOWER IN increased weight	0.333333
LOWER IN top weight group	0.333333
increased weight	0.333333
top weight group	0.333333
LOWER IN decreased weight	0.333333
LOWER IN bottom weight group	0.333333
thailand	0.166667
intestine	0.062500
farm	0.045455

Fraction of dbbact annotations with this term covered by the query

Term	Score
decreased weight	0.500000
bottom weight group	0.500000
LOWER IN increased weight	0.500000
LOWER IN top weight group	0.500000
penaeus monodon	0.500000
black tiger shrimp	0.500000
increased weight	0.500000
top weight group	0.500000
LOWER IN decreased weight	0.500000
LOWER IN bottom weight group	0.500000
thailand	0.090909
intestine	0.032258
farm	0.023256

Fraction of annotations for the query sequences containing the term

Term	Score
farm	1.000000
intestine	1.000000
thailand	1.000000
penaeus monodon	1.000000
black tiger shrimp	1.000000
decreased weight	0.250000
bottom weight group	0.250000
LOWER IN increased weight	0.250000
LOWER IN top weight group	0.250000
increased weight	0.250000
top weight group	0.250000
LOWER IN decreased weight	0.250000
LOWER IN bottom weight group	0.250000

Number of experiments associating the term to the sequence

Term	Score
decreased weight	1.000000
bottom weight group	1.000000
LOWER IN increased weight	1.000000
LOWER IN top weight group	1.000000
farm	1.000000
intestine	1.000000
thailand	1.000000
penaeus monodon	1.000000
black tiger shrimp	1.000000
increased weight	1.000000
top weight group	1.000000
LOWER IN decreased weight	1.000000
LOWER IN bottom weight group	1.000000

Exp. ID	User ID	Description	Date	Region	Sequences	Status	Flag
778	amnon	high in increased weight top weight group compared to decreased weight bottom weight group in farm intestine thailand penaeus monodon black tiger shrimp	2021-04-28	v3	1 / 9	approved	No
778	amnon	dominant farm, intestine, thailand, penaeus monodon, black tiger shrimp	2021-04-28	v3	1 / 15	approved	No
778	amnon	common farm, intestine, thailand, penaeus monodon, black tiger shrimp	2021-04-28	v3	1 / 25	approved	No
778	amnon	high in decreased weight bottom weight group compared to increased weight top weight group in farm intestine thailand penaeus monodon black tiger shrimp	2021-04-28	v3	1 / 40	approved	No

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