dbBact

Field	Description
name	the effects of soil depth on the structure of microbial communities in agricultural soils in iowa (united states)
sra	prjna638682
doi	https://doi.org/10.1128/aem.02673-20
datamd5	112fa2ed6018a35f660e5978f9ba285d
mapmd5	2c889911998016e1f6fd9488287ce917

term enrichment score

Term	Score
des moines	0.666667
nicollet soil series	0.666667
iowa	0.500000
ames	0.400000
kelley	0.400000
subsurface drainage	0.400000
kanawha	0.400000
depth (soil) 60-90cm	0.375000
depth (soil) 0-15cm	0.315789
depth (soil) 15-30cm	0.250000
depth (soil) 30-60cm	0.250000
glycine max	0.235294
ph 7.4	0.210526
zea mays	0.200000
agricultural field	0.200000
ph 7.7	0.190476
LOWER IN depth (soil) 60-90cm	0.166667
LOWER IN depth (soil) 0-15cm	0.166667
ph 6.2	0.117647
ph 7.1	0.117647
ph 8.3	0.117647
ph 8.1	0.117647
ph 7.5	0.111111
ph 6.7	0.111111
ph 7.9	0.111111
ph 6	0.095238
soil	0.019417
united states of america	0.006689

Fraction of dbbact annotations with this term covered by the query

Term	Score
ames	0.500000
des moines	0.500000
nicollet soil series	0.500000
kelley	0.500000
ph 6.2	0.500000
subsurface drainage	0.500000
LOWER IN depth (soil) 60-90cm	0.500000
ph 7.4	0.500000
ph 7.1	0.500000
kanawha	0.500000
depth (soil) 60-90cm	0.500000
ph 8.3	0.500000
ph 8.1	0.500000
LOWER IN depth (soil) 0-15cm	0.500000
iowa	0.333333
ph 7.5	0.333333
depth (soil) 0-15cm	0.333333
depth (soil) 15-30cm	0.333333
depth (soil) 30-60cm	0.333333
ph 6.7	0.333333
ph 7.9	0.333333
ph 7.7	0.333333
ph 6	0.166667
glycine max	0.142857
zea mays	0.111111
agricultural field	0.111111
soil	0.009804
united states of america	0.003356

Fraction of annotations for the query sequences containing the term

Term	Score
united states of america	1.000000
soil	1.000000
zea mays	1.000000
iowa	1.000000
agricultural field	1.000000
des moines	1.000000
nicollet soil series	1.000000
glycine max	0.666667
ames	0.333333
kelley	0.333333
subsurface drainage	0.333333
kanawha	0.333333
depth (soil) 0-15cm	0.300000
depth (soil) 60-90cm	0.300000
depth (soil) 15-30cm	0.200000
depth (soil) 30-60cm	0.200000
ph 7.4	0.133333
ph 7.7	0.133333
LOWER IN depth (soil) 60-90cm	0.100000
LOWER IN depth (soil) 0-15cm	0.100000
ph 7.5	0.066667
ph 6.2	0.066667
ph 7.1	0.066667
ph 6	0.066667
ph 8.3	0.066667
ph 6.7	0.066667
ph 8.1	0.066667
ph 7.9	0.066667

Number of experiments associating the term to the sequence

Term	Score
united states of america	1.000000
soil	1.000000
zea mays	1.000000
glycine max	1.000000
iowa	1.000000
agricultural field	1.000000
ames	1.000000
des moines	1.000000
ph 7.5	1.000000
depth (soil) 0-15cm	1.000000
nicollet soil series	1.000000
kelley	1.000000
ph 6.2	1.000000
subsurface drainage	1.000000
LOWER IN depth (soil) 60-90cm	1.000000
depth (soil) 15-30cm	1.000000
ph 7.4	1.000000
ph 7.1	1.000000
kanawha	1.000000
ph 6	1.000000
depth (soil) 30-60cm	1.000000
depth (soil) 60-90cm	1.000000
ph 8.3	1.000000
ph 6.7	1.000000
ph 8.1	1.000000
ph 7.9	1.000000
ph 7.7	1.000000
LOWER IN depth (soil) 0-15cm	1.000000

Search:

Exp. ID	User ID	Description	Date	Region	Sequences	Status	Flag
801	sheryo	Dominant in soybean and corn agriculture fields at depth 0-15cm, Iowa USA (dominant united states of america, soil, zea mays, glycine max, iowa, agricultural field, ames, des moines, ph 7.5, depth (soil) 0-15cm, nicollet soil series)	2021-06-15	v4	1 / 3	approved	No
801	sheryo	Dominant at depth 0-15cm in corn and soybean agriculture fields, Iowa USA (dominant united states of america, soil, zea mays, glycine max, iowa, agricultural field, des moines, depth (soil) 0-15cm, nicollet soil series, kelley, ph 6.2, subsurface drainage)	2021-06-15	v4	1 / 3	approved	No
801	sheryo	Dominant at depth 15-30cm in corn and soybean agriculture fields, Iowa USA (dominant united states of america, soil, zea mays, glycine max, iowa, ph 6, agricultural field, des moines, nicollet soil series, depth (soil) 15-30cm, kelley, subsurface drainage)	2021-06-15	v4	1 / 4	approved	No
801	sheryo	Dominant at depth 60-90cm in corn and soybean agriculture fields, Iowa USA (dominant united states of america, soil, zea mays, glycine max, iowa, agricultural field, des moines, ph 7.9, nicollet soil series, depth (soil) 60-90cm, kelley, subsurface drainage)	2021-06-16	v4	1 / 4	approved	No
801	sheryo	Dominant at depth 0-15cm in corn agriculture fields, Iowa USA (dominant united states of america, soil, zea mays, iowa, agricultural field, des moines, depth (soil) 0-15cm, nicollet soil series, ph 7.1, kanawha)	2021-06-15	v4	1 / 5	approved	No
801	sheryo	Dominant at depth 30-60cm in corn and soybean agriculture fields, Iowa USA (dominant united states of america, soil, zea mays, glycine max, iowa, agricultural field, des moines, ph 6.7, depth (soil) 30-60cm, nicollet soil series, kelley, subsurface drainage)	2021-06-16	v4	1 / 5	approved	No
801	sheryo	Dominant at depth 15-30cm in corn agriculture fields, Iowa USA (dominant united states of america, soil, zea mays, iowa, agricultural field, des moines, ph 7.7, nicollet soil series, depth (soil) 15-30cm, kanawha)	2021-06-15	v4	1 / 6	approved	No
801	sheryo	Dominant at depth 60-90cm in corn agriculture fields, Iowa USA (dominant united states of america, soil, zea mays, iowa, agricultural field, des moines, nicollet soil series, depth (soil) 60-90cm, kanawha, ph 8.3)	2021-06-15	v4	1 / 6	approved	No
801	sheryo	Dominant in soybean and corn agriculture fields at depth 60-90cm, Iowa USA (dominant united states of america, soil, zea mays, glycine max, iowa, agricultural field, ames, des moines, ph 7.7, nicollet soil series, depth (soil) 60-90cm)	2021-06-15	v4	1 / 8	approved	No
801	sheryo	Dominant in soybean and corn agriculture fields at depth 15-30cm, Iowa USA (dominant united states of america, soil, zea mays, glycine max, iowa, agricultural field, ames, des moines, nicollet soil series, depth (soil) 15-30cm, ph 7.4)	2021-06-15	v4	1 / 9	approved	No
801	sheryo	Dominant in soybean and corn agriculture fields at depth 30-60cm, Iowa USA (dominant united states of america, soil, zea mays, glycine max, iowa, agricultural field, ames, des moines, depth (soil) 30-60cm, nicollet soil series, ph 7.4)	2021-06-15	v4	1 / 9	approved	No
801	sheryo	Dominant at depth 30-60cm in corn agriculture fields, Iowa USA (dominant united states of america, soil, zea mays, iowa, agricultural field, des moines, depth (soil) 30-60cm, nicollet soil series, kanawha, ph 8.1)	2021-06-15	v4	1 / 9	approved	No
801	sheryo	Higher at depth 60-90cm compared to depth 0-15cm in corn and soybean agriculture fields, Iowa USA ( high in depth (soil) 60-90cm compared to depth (soil) 0-15cm in united states of america soil zea mays glycine max iowa agricultural field des moines nicollet soil series kelley subsurface drainage )	2021-06-16	v4	1 / 321	approved	No
801	sheryo	Higher at depth 60-90cm compared to depth 0-15cm in corn agriculture fields, Iowa USA ( high in depth (soil) 60-90cm compared to depth (soil) 0-15cm in united states of america soil zea mays iowa agricultural field des moines nicollet soil series kanawha )	2021-06-15	v4	1 / 369	approved	No
801	sheryo	Higher at depth 60-90cm compared to depth0-15cm in soybean and corn agriculture fields , Iowa USA ( high in depth (soil) 60-90cm compared to depth (soil) 0-15cm in united states of america soil zea mays glycine max iowa agricultural field ames des moines nicollet soil series )	2021-06-15	v4	1 / 386	approved	No
801	sheryo	Higher at depth 0-15cm compared to depth 60-90cm in corn agriculture fields, Iowa USA ( high in depth (soil) 0-15cm compared to depth (soil) 60-90cm in united states of america soil zea mays iowa agricultural field des moines nicollet soil series kanawha )	2021-06-15	v4	1 / 501	approved	No
801	sheryo	Common at depth 15-30cm in corn agriculture fields, Iowa USA (common united states of america, soil, zea mays, iowa, agricultural field, des moines, ph 7.7, nicollet soil series, depth (soil) 15-30cm, kanawha)	2021-06-15	v4	1 / 598	approved	No
801	sheryo	Common in soybean and corn agriculture fields at depth 60-90cm, Iowa USA (common united states of america, soil, zea mays, glycine max, iowa, agricultural field, ames, des moines, ph 7.7, nicollet soil series, depth (soil) 60-90cm)	2021-06-15	v4	1 / 650	approved	No
801	sheryo	Common at depth 60-90cm in corn and soybean agriculture fields, Iowa USA (common united states of america, soil, zea mays, glycine max, iowa, agricultural field, des moines, ph 7.9, nicollet soil series, depth (soil) 60-90cm, kelley, subsurface drainage)	2021-06-16	v4	1 / 667	approved	No
801	sheryo	Common at depth 30-60cm in corn agriculture fields, Iowa USA (common united states of america, soil, zea mays, iowa, agricultural field, des moines, depth (soil) 30-60cm, nicollet soil series, kanawha, ph 8.1)	2021-06-15	v4	1 / 703	approved	No
801	sheryo	Common at depth 30-60cm in corn and soybean agriculture fields, Iowa USA (common united states of america, soil, zea mays, glycine max, iowa, agricultural field, des moines, ph 6.7, depth (soil) 30-60cm, nicollet soil series, kelley, subsurface drainage)	2021-06-15	v4	1 / 760	approved	No
801	sheryo	Common at depth 60-90cm in corn agriculture fields, Iowa USA (common united states of america, soil, zea mays, iowa, agricultural field, des moines, nicollet soil series, depth (soil) 60-90cm, kanawha, ph 8.3)	2021-06-15	v4	1 / 764	approved	No
801	sheryo	Common in soybean and corn agriculture fields at depth 30-60cm, Iowa USA (common united states of america, soil, zea mays, glycine max, iowa, agricultural field, ames, des moines, depth (soil) 30-60cm, nicollet soil series, ph 7.4)	2021-06-15	v4	1 / 839	approved	No
801	sheryo	Common at depth 15-30cm in corn and soybean agriculture fields, Iowa USA (common united states of america, soil, zea mays, glycine max, iowa, ph 6, agricultural field, des moines, nicollet soil series, depth (soil) 15-30cm, kelley, subsurface drainage)	2021-06-15	v4	1 / 841	approved	No
801	sheryo	Common at depth 0-15cm in corn agriculture fields, Iowa USA (common united states of america, soil, zea mays, iowa, agricultural field, des moines, depth (soil) 0-15cm, nicollet soil series, ph 7.1, kanawha)	2021-06-15	v4	1 / 862	approved	No
801	sheryo	Common in soybean and corn agriculture fields at depth 15-30cm, Iowa USA (common united states of america, soil, zea mays, glycine max, iowa, agricultural field, ames, des moines, nicollet soil series, depth (soil) 15-30cm, ph 7.4)	2021-06-15	v4	1 / 905	approved	No
801	sheryo	Higher at depth 0-15cm compared to depth 60-90cm in corn and soybean agriculture fields, Iowa USA ( high in depth (soil) 0-15cm compared to depth (soil) 60-90cm in united states of america soil zea mays glycine max iowa agricultural field des moines nicollet soil series kelley subsurface drainage )	2021-06-16	v4	1 / 1036	approved	No
801	sheryo	Higher at depth 0-15cm compared to depth 60-90cm in soybean and corn agriculture fields , Iowa USA ( high in depth (soil) 0-15cm compared to depth (soil) 60-90cm in united states of america soil zea mays glycine max iowa agricultural field ames des moines nicollet soil series )	2021-06-15	v4	1 / 1102	approved	No
801	sheryo	Common at depth 0-15cm in corn and soybean agriculture fields, Iowa USA (common united states of america, soil, zea mays, glycine max, iowa, agricultural field, des moines, depth (soil) 0-15cm, nicollet soil series, kelley, ph 6.2, subsurface drainage)	2021-06-15	v4	1 / 1202	approved	No
801	sheryo	Common in soybean and corn agriculture fields at depth 0-15cm, Iowa USA (common united states of america, soil, zea mays, glycine max, iowa, agricultural field, ames, des moines, ph 7.5, depth (soil) 0-15cm, nicollet soil series)	2021-06-15	v4	1 / 1226	approved	No

Showing 1 to 30 of 30 entries

Experiment ID: 801

Annotations for experiment: