dbBact

Experiment ID: 809

Field	Description
name	composition and diversity of bacterial communities in the rhizosphere of the chinese medicinal herb dendrobium
sra	prjna638443
doi	https://doi.org/10.1186/s12870-021-02893-y
datamd5	41bbb7b0fe5d317f16a3957053d1b62f
mapmd5	848f8bd886349a3d5dd583cb365bcb84

Annotations for experiment:

term enrichment score

Term	Score
lu'an city prefecture	0.666667
flowerpot	0.666667
dendrobium huoshanense	0.444444
dendrobium officinale	0.444444
dendrobium moniliforme	0.285714
greenhouse	0.285714
rhizosphere	0.038462
research facility	0.010471
china	0.009524

Fraction of dbbact annotations with this term covered by the query

Term	Score
lu'an city prefecture	0.500000
dendrobium huoshanense	0.500000
flowerpot	0.500000
dendrobium moniliforme	0.500000
dendrobium officinale	0.500000
greenhouse	0.166667
rhizosphere	0.019608
research facility	0.005263
china	0.004785

Fraction of annotations for the query sequences containing the term

Term	Score
research facility	1.000000
rhizosphere	1.000000
greenhouse	1.000000
china	1.000000
lu'an city prefecture	1.000000
flowerpot	1.000000
dendrobium huoshanense	0.400000
dendrobium officinale	0.400000
dendrobium moniliforme	0.200000

Number of experiments associating the term to the sequence

Term	Score
research facility	1.000000
rhizosphere	1.000000
greenhouse	1.000000
china	1.000000
lu'an city prefecture	1.000000
dendrobium huoshanense	1.000000
flowerpot	1.000000
dendrobium moniliforme	1.000000
dendrobium officinale	1.000000

Exp. ID	User ID	Description	Date	Region	Sequences	Status	Flag
809	amnon	dominant research facility, rhizosphere, greenhouse, china, lu'an city prefecture, dendrobium huoshanense, flowerpot	2021-06-20	v4	1 / 1	approved	No
809	amnon	dominant research facility, rhizosphere, greenhouse, china, lu'an city prefecture, dendrobium officinale, flowerpot	2021-06-20	v4	1 / 3	approved	No
809	amnon	common research facility, rhizosphere, greenhouse, china, lu'an city prefecture, dendrobium officinale, flowerpot	2021-06-20	v4	1 / 715	approved	No
809	amnon	common research facility, rhizosphere, greenhouse, china, lu'an city prefecture, dendrobium moniliforme, flowerpot	2021-06-20	v4	1 / 1002	approved	No
809	amnon	common research facility, rhizosphere, greenhouse, china, lu'an city prefecture, dendrobium huoshanense, flowerpot	2021-06-20	v4	1 / 1356	approved	No

Problems / suggestions? Please visit the dbBact forum