dbBact

Experiment ID: 81

Field	Description
name	community-level differences in the microbiome of healthy wild mallards and those infected by influenza a viruses
sra	srp100441
datamd5	4b8210df8ef21550bcfea39ae40f1257
mapmd5	1b879b740117c2cf846e5083b7a5d40b

Annotations for experiment:

term enrichment score

Term	Score
mallard	0.666667
anas platyrhynchos	0.400000
LOWER IN influenza	0.333333
influenza	0.333333
cloaca	0.181818
state of california	0.062500
LOWER IN control	0.009346
control	0.009132

Fraction of dbbact annotations with this term covered by the query

Term	Score
LOWER IN influenza	0.500000
mallard	0.500000
influenza	0.500000
anas platyrhynchos	0.250000
cloaca	0.100000
state of california	0.032258
LOWER IN control	0.004762
control	0.004651

Fraction of annotations for the query sequences containing the term

Term	Score
cloaca	1.000000
anas platyrhynchos	1.000000
state of california	1.000000
mallard	1.000000
control	0.250000
LOWER IN influenza	0.250000
influenza	0.250000
LOWER IN control	0.250000

Number of experiments associating the term to the sequence

Term	Score
control	1.000000
LOWER IN influenza	1.000000
cloaca	1.000000
anas platyrhynchos	1.000000
state of california	1.000000
mallard	1.000000
influenza	1.000000
LOWER IN control	1.000000

Exp. ID	User ID	Description	Date	Region	Sequences	Status	Flag
81	amnon	dominant cloaca, anas platyrhynchos, state of california, mallard	2017-03-05	v4	1 / 17	approved	No
81	amnon	common cloaca, anas platyrhynchos, state of california, mallard	2017-03-05	v4	1 / 30	approved	No
81	amnon	high in influenza A positive mallards compared to healthy mallards ( high in influenza compared to control in cloaca anas platyrhynchos state of california mallard )	2017-03-05	v4	1 / 37	approved	No
81	amnon	high in healthy mallards compared to influenza A positive mallars ( high in control compared to influenza in cloaca anas platyrhynchos state of california mallard )	2017-03-05	v4	1 / 131	approved	No

Problems / suggestions? Please visit the dbBact forum