dbBact

Experiment ID: 815

Field	Description
name	comparative analyses of the gut microbiome of two fox species, the red fox (vulpes vulpes) and corsac fox (vulpes corsac), that occupy different ecological niches
name	https://doi.org/10.1007/s00248-021-01806-8
sra	prjna646772
datamd5	c678924b780caebc593ed1bbe2961d66
mapmd5	04cf12cb91d614a20ab7214d48d4a2aa

Annotations for experiment:

term enrichment score

Term	Score
lake hulun	0.666667
vulpes vulpes	0.500000
red fox	0.500000
vulpes corsac	0.500000
corsac fox	0.500000
mongolia	0.285714
LOWER IN vulpes vulpes	0.250000
LOWER IN red fox	0.250000
LOWER IN vulpes corsac	0.250000
LOWER IN corsac fox	0.250000
winter season	0.080000
wild	0.054054
feces	0.004619

Fraction of dbbact annotations with this term covered by the query

Term	Score
vulpes vulpes	0.500000
lake hulun	0.500000
red fox	0.500000
vulpes corsac	0.500000
corsac fox	0.500000
LOWER IN vulpes vulpes	0.500000
LOWER IN red fox	0.500000
LOWER IN vulpes corsac	0.500000
LOWER IN corsac fox	0.500000
mongolia	0.166667
winter season	0.041667
wild	0.027778
feces	0.002315

Fraction of annotations for the query sequences containing the term

Term	Score
feces	1.000000
mongolia	1.000000
winter season	1.000000
lake hulun	1.000000
wild	1.000000
vulpes vulpes	0.500000
red fox	0.500000
vulpes corsac	0.500000
corsac fox	0.500000
LOWER IN vulpes vulpes	0.166667
LOWER IN red fox	0.166667
LOWER IN vulpes corsac	0.166667
LOWER IN corsac fox	0.166667

Number of experiments associating the term to the sequence

Term	Score
feces	1.000000
mongolia	1.000000
winter season	1.000000
vulpes vulpes	1.000000
lake hulun	1.000000
red fox	1.000000
wild	1.000000
vulpes corsac	1.000000
corsac fox	1.000000
LOWER IN vulpes vulpes	1.000000
LOWER IN red fox	1.000000
LOWER IN vulpes corsac	1.000000
LOWER IN corsac fox	1.000000

Exp. ID	User ID	Description	Date	Region	Sequences	Status	Flag
815	amnon	high in vulpes vulpes red fox compared to vulpes corsac corsac fox in feces mongolia winter season lake hulun wild	2021-07-04	v3	1 / 12	approved	No
815	amnon	high in vulpes corsac corsac fox compared to vulpes vulpes red fox in feces mongolia winter season lake hulun wild	2021-07-04	v3	1 / 15	approved	No
815	amnon	dominant feces, mongolia, winter season, vulpes vulpes, lake hulun, red fox, wild	2021-07-04	v3	1 / 24	approved	No
815	amnon	dominant feces, mongolia, winter season, lake hulun, vulpes corsac, corsac fox, wild	2021-07-04	v3	1 / 27	approved	No
815	amnon	common feces, mongolia, winter season, lake hulun, vulpes corsac, corsac fox, wild	2021-07-04	v3	1 / 146	approved	No
815	amnon	common feces, mongolia, winter season, vulpes vulpes, lake hulun, red fox, wild	2021-07-04	v3	1 / 160	approved	No

Problems / suggestions? Please visit the dbBact forum