dbBact

Experiment ID: 865

Field	Description
name	analysis and comparison of the wolf microbiome under different environmental factors using three different data of next generation sequencing
sra	prjna342752
doi	https://doi.org/10.1038/s41598-017-11770-4
datamd5	f0093e07c0ac81e1cb0e2cd68f7526a5
mapmd5	12f94f7811aac7af1902047adbb6e9f8

Annotations for experiment:

term enrichment score

Term	Score
inner mongolia autonomous region	0.400000
wolf	0.250000
canis lupus	0.222222
LOWER IN canis lupus	0.181818
LOWER IN wolf	0.181818
LOWER IN canis lupus familiaris	0.166667
LOWER IN dog	0.166667
dog	0.057143
canis lupus familiaris	0.051282
china	0.009524
feces	0.004619

Fraction of dbbact annotations with this term covered by the query

Term	Score
inner mongolia autonomous region	0.500000
LOWER IN canis lupus	0.200000
LOWER IN wolf	0.200000
wolf	0.166667
LOWER IN canis lupus familiaris	0.166667
LOWER IN dog	0.166667
canis lupus	0.142857
dog	0.030303
canis lupus familiaris	0.027027
china	0.004785
feces	0.002315

Fraction of annotations for the query sequences containing the term

Term	Score
feces	1.000000
china	1.000000
canis lupus familiaris	0.500000
dog	0.500000
canis lupus	0.500000
wolf	0.500000
inner mongolia autonomous region	0.333333
LOWER IN canis lupus	0.166667
LOWER IN wolf	0.166667
LOWER IN canis lupus familiaris	0.166667
LOWER IN dog	0.166667

Number of experiments associating the term to the sequence

Term	Score
feces	1.000000
canis lupus familiaris	1.000000
dog	1.000000
china	1.000000
inner mongolia autonomous region	1.000000
canis lupus	1.000000
wolf	1.000000
LOWER IN canis lupus	1.000000
LOWER IN wolf	1.000000
LOWER IN canis lupus familiaris	1.000000
LOWER IN dog	1.000000

Exp. ID	User ID	Description	Date	Region	Sequences	Status	Flag
865	amnon	high in canis lupus wolf compared to canis lupus familiaris dog in feces china	2022-02-08	v3	1 / 14	approved	No
865	amnon	dominant feces, canis lupus familiaris, dog, china, inner mongolia autonomous region	2022-02-08	v3	1 / 18	approved	No
865	amnon	dominant feces, canis lupus, china, wolf	2022-02-08	v3	1 / 22	approved	No
865	amnon	high in canis lupus familiaris dog compared to canis lupus wolf in feces china	2022-02-08	v3	1 / 35	approved	No
865	amnon	common feces, canis lupus, china, wolf	2022-02-08	v3	1 / 51	approved	No
865	amnon	common feces, canis lupus familiaris, dog, china, inner mongolia autonomous region	2022-02-08	v3	1 / 64	approved	No

Problems / suggestions? Please visit the dbBact forum