Experiment ID: 905

Field Description
namebacterial communities in the gastrointestinal tract segments of helminth-resistant and helminth-susceptible sheep
sraprjna674764
doihttps://doi.org/10.1186/s42523-022-00172-1
datamd5a054f7ffcec461ae2baff29d6082fb00
mapmd54f3b1b2a8054daadb710471ce670e28e

Annotations for experiment:

term enrichment score
TermScore
western australia0.666667
age 1 year0.333333
abomasum0.243902
LOWER IN abomasum0.187500
jejunum0.140845
sheep0.133333
LOWER IN rumen0.127660
LOWER IN jejunum0.120000
ovis aries0.117647
LOWER IN ileum0.084507
ileum0.082645
duodenum0.074074
colon0.067797
rumen0.066225
LOWER IN colon0.064516
LOWER IN caecum0.062500
australia0.062500
LOWER IN feces0.047619
caecum0.036036
research facility0.010753
feces0.004711
Fraction of dbbact annotations with this term covered by the query
TermScore
western australia0.500000
LOWER IN abomasum0.500000
abomasum0.333333
age 1 year0.200000
LOWER IN rumen0.142857
LOWER IN jejunum0.125000
jejunum0.111111
sheep0.071429
duodenum0.071429
LOWER IN ileum0.066667
ovis aries0.062500
LOWER IN colon0.055556
LOWER IN caecum0.052632
ileum0.052632
colon0.043478
rumen0.040000
LOWER IN feces0.034483
australia0.032258
caecum0.020408
research facility0.005405
feces0.002392
Fraction of annotations for the query sequences containing the term
TermScore
research facility1.000000
ovis aries1.000000
australia1.000000
age 1 year1.000000
sheep1.000000
western australia1.000000
abomasum0.192308
rumen0.192308
jejunum0.192308
ileum0.192308
feces0.153846
caecum0.153846
colon0.153846
LOWER IN abomasum0.115385
LOWER IN rumen0.115385
LOWER IN jejunum0.115385
LOWER IN ileum0.115385
LOWER IN feces0.076923
LOWER IN caecum0.076923
LOWER IN colon0.076923
duodenum0.076923
Number of experiments associating the term to the sequence
TermScore
abomasum1.000000
rumen1.000000
LOWER IN feces1.000000
LOWER IN caecum1.000000
LOWER IN colon1.000000
research facility1.000000
ovis aries1.000000
australia1.000000
age 1 year1.000000
sheep1.000000
western australia1.000000
feces1.000000
caecum1.000000
colon1.000000
LOWER IN abomasum1.000000
LOWER IN rumen1.000000
LOWER IN jejunum1.000000
LOWER IN ileum1.000000
jejunum1.000000
ileum1.000000
duodenum1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
905amnondominant research facility, rumen, ovis aries, australia, age 1 year, sheep, western australia2022-05-18v31 / 5approvedNo
905amnondominant research facility, abomasum, ovis aries, australia, age 1 year, sheep, western australia2022-05-18v31 / 8approvedNo
905amnondominant research facility, ileum, ovis aries, australia, age 1 year, sheep, western australia2022-05-18v31 / 9approvedNo
905amnondominant research facility, colon, ovis aries, australia, age 1 year, sheep, western australia2022-05-18v31 / 9approvedNo
905amnondominant research facility, jejunum, ovis aries, australia, age 1 year, sheep, western australia2022-05-18v31 / 9approvedNo
905amnondominant research facility, caecum, ovis aries, australia, age 1 year, sheep, western australia2022-05-18v31 / 10approvedNo
905amnondominant feces, research facility, ovis aries, australia, age 1 year, sheep, western australia2022-05-18v31 / 10approvedNo
905amnondominant research facility, duodenum, ovis aries, australia, age 1 year, sheep, western australia2022-05-18v31 / 15approvedNo
905amnon high in jejunum compared to ileum in research facility ovis aries australia age 1 year sheep western australia 2022-05-19v31 / 32approvedNo
905amnon high in ileum compared to jejunum in research facility ovis aries australia age 1 year sheep western australia 2022-05-19v31 / 61approvedNo
905amnon high in abomasum compared to rumen in research facility ovis aries australia age 1 year sheep western australia 2022-05-19v31 / 78approvedNo
905amnoncommon research facility, jejunum, ovis aries, australia, age 1 year, sheep, western australia2022-05-18v31 / 114approvedNo
905amnoncommon research facility, ileum, ovis aries, australia, age 1 year, sheep, western australia2022-05-18v31 / 137approvedNo
905amnoncommon research facility, duodenum, ovis aries, australia, age 1 year, sheep, western australia2022-05-18v31 / 200approvedNo
905amnon high in rumen compared to abomasum in research facility ovis aries australia age 1 year sheep western australia 2022-05-19v31 / 264approvedNo
905amnoncommon feces, research facility, ovis aries, australia, age 1 year, sheep, western australia2022-05-18v31 / 401approvedNo
905amnoncommon research facility, caecum, ovis aries, australia, age 1 year, sheep, western australia2022-05-18v31 / 417approvedNo
905amnoncommon research facility, abomasum, ovis aries, australia, age 1 year, sheep, western australia2022-05-18v31 / 460approvedNo
905amnoncommon research facility, colon, ovis aries, australia, age 1 year, sheep, western australia2022-05-18v31 / 523approvedNo
905amnon high in jejunum ileum compared to abomasum rumen in research facility ovis aries australia age 1 year sheep western australia 2022-05-18v31 / 563approvedNo
905amnoncommon research facility, rumen, ovis aries, australia, age 1 year, sheep, western australia2022-05-18v31 / 597approvedNo
905amnon high in jejunum ileum compared to feces caecum colon in research facility ovis aries australia age 1 year sheep western australia 2022-05-18v31 / 1092approvedNo
905amnon high in abomasum rumen compared to jejunum ileum in research facility ovis aries australia age 1 year sheep western australia 2022-05-18v31 / 2033approvedNo
905amnon high in feces caecum colon compared to jejunum ileum in research facility ovis aries australia age 1 year sheep western australia 2022-05-18v31 / 2246approvedNo
905amnon high in feces caecum colon compared to abomasum rumen in research facility ovis aries australia age 1 year sheep western australia 2022-05-19v31 / 2270approvedNo
905amnon high in abomasum rumen compared to feces caecum colon in research facility ovis aries australia age 1 year sheep western australia 2022-05-19v31 / 2737approvedNo

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