dbBact

Experiment ID: 920

Field	Description
name	kimchi intake alleviates obesity-induced neuroinflammation by modulating the gut-brain axis
sra	prjna781765
doi	https://doi.org/10.1016/j.foodres.2022.111533
datamd5	46ec6f69e8b507f99093f381a35cd08d
mapmd5	d1e21e6c6a42bca5e0b7db40ce7c9d3a

Annotations for experiment:

term enrichment score

Term	Score
high fat diet	0.117647
mouse chow	0.117647
male organism	0.111111
south korea	0.105263
LOWER IN high fat diet	0.100000
LOWER IN mouse chow	0.086957
c57bl/6	0.080000
mouse	0.029851
mus musculus	0.027027
research facility	0.010471
feces	0.004619

Fraction of dbbact annotations with this term covered by the query

Term	Score
LOWER IN high fat diet	0.071429
high fat diet	0.066667
mouse chow	0.066667
male organism	0.058824
LOWER IN mouse chow	0.058824
south korea	0.055556
c57bl/6	0.041667
mouse	0.015152
mus musculus	0.013699
research facility	0.005263
feces	0.002315

Fraction of annotations for the query sequences containing the term

Term	Score
feces	1.000000
research facility	1.000000
mus musculus	1.000000
c57bl/6	1.000000
mouse	1.000000
male organism	1.000000
south korea	1.000000
high fat diet	0.500000
mouse chow	0.500000
LOWER IN mouse chow	0.166667
LOWER IN high fat diet	0.166667

Number of experiments associating the term to the sequence

Term	Score
feces	1.000000
research facility	1.000000
mus musculus	1.000000
high fat diet	1.000000
c57bl/6	1.000000
mouse	1.000000
male organism	1.000000
south korea	1.000000
mouse chow	1.000000
LOWER IN mouse chow	1.000000
LOWER IN high fat diet	1.000000

Exp. ID	User ID	Description	Date	Region	Sequences	Status	Flag
920	amnon	high in mouse chow compared to high fat diet in feces research facility mus musculus c57bl/6 mouse male organism south korea	2022-07-19	v3	1 / 16	approved	No
920	amnon	dominant feces, research facility, mus musculus, c57bl/6, mouse, mouse chow, male organism, south korea	2022-07-19	v3	1 / 17	approved	No
920	amnon	high in high fat diet compared to mouse chow in feces research facility mus musculus c57bl/6 mouse male organism south korea	2022-07-19	v3	1 / 18	approved	No
920	amnon	dominant feces, research facility, mus musculus, high fat diet, c57bl/6, mouse, male organism, south korea	2022-07-19	v3	1 / 20	approved	No
920	amnon	common feces, research facility, mus musculus, c57bl/6, mouse, mouse chow, male organism, south korea	2022-07-19	v3	1 / 135	approved	No
920	amnon	common feces, research facility, mus musculus, high fat diet, c57bl/6, mouse, male organism, south korea	2022-07-19	v3	1 / 137	approved	No

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