dbBact

Experiment ID: 934

Field	Description
name	chicken jejunal microbiota improves growth performance by mitigating intestinal inflammation
sra	prjna707106
doi	https://doi.org/10.1186/s40168-022-01299-8
datamd5	52383796501107933d32d9223aada1b4
mapmd5	a2a9cbc303a8bf92be5f53562205c62c

Annotations for experiment:

term enrichment score

Term	Score
wuhan	0.666667
age 7 weeks	0.666667
jejunal mucosa	0.500000
lumen of jejunum	0.500000
LOWER IN lumen of jejunum	0.250000
LOWER IN jejunal mucosa	0.250000
jejunum	0.200000
chicken	0.090909
gallus gallus	0.086957
research facility	0.010471
china	0.009524

Fraction of dbbact annotations with this term covered by the query

Term	Score
jejunal mucosa	0.500000
wuhan	0.500000
age 7 weeks	0.500000
lumen of jejunum	0.500000
LOWER IN lumen of jejunum	0.500000
LOWER IN jejunal mucosa	0.500000
jejunum	0.111111
chicken	0.047619
gallus gallus	0.045455
research facility	0.005263
china	0.004785

Fraction of annotations for the query sequences containing the term

Term	Score
research facility	1.000000
jejunum	1.000000
gallus gallus	1.000000
chicken	1.000000
china	1.000000
wuhan	1.000000
age 7 weeks	1.000000
jejunal mucosa	0.500000
lumen of jejunum	0.500000
LOWER IN lumen of jejunum	0.166667
LOWER IN jejunal mucosa	0.166667

Number of experiments associating the term to the sequence

Term	Score
research facility	1.000000
jejunum	1.000000
gallus gallus	1.000000
chicken	1.000000
jejunal mucosa	1.000000
china	1.000000
wuhan	1.000000
age 7 weeks	1.000000
lumen of jejunum	1.000000
LOWER IN lumen of jejunum	1.000000
LOWER IN jejunal mucosa	1.000000

Exp. ID	User ID	Description	Date	Region	Sequences	Status	Flag
934	amnon	dominant research facility, jejunum, gallus gallus, chicken, jejunal mucosa, china, wuhan, age 7 weeks	2022-09-18	v3	1 / 15	approved	No
934	amnon	dominant research facility, jejunum, gallus gallus, chicken, lumen of jejunum, china, wuhan, age 7 weeks	2022-09-18	v3	1 / 15	approved	No
934	amnon	high in lumen of jejunum compared to jejunal mucosa in research facility jejunum gallus gallus chicken china wuhan age 7 weeks	2022-09-18	v3	1 / 23	approved	No
934	amnon	high in jejunal mucosa compared to lumen of jejunum in research facility jejunum gallus gallus chicken china wuhan age 7 weeks	2022-09-18	v3	1 / 72	approved	No
934	amnon	common research facility, jejunum, gallus gallus, chicken, lumen of jejunum, china, wuhan, age 7 weeks	2022-09-18	v3	1 / 73	approved	No
934	amnon	common research facility, jejunum, gallus gallus, chicken, jejunal mucosa, china, wuhan, age 7 weeks	2022-09-18	v3	1 / 127	approved	No

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