Experiment ID: 978

Field Description
nameanalysis of gut microbiome profiles in common marmosets (callithrix jacchus) in health and intestinal disease
sraprjna659472
doihttps://doi.org/10.1038/s41598-022-08255-4
datamd5d36cbea756d489b802c2523af69a16bb
mapmd50a17a6096ea1030d54e9ba28f29589a3

Annotations for experiment:

Fraction of dbbact annotations with this term covered by the query
TermScore
new england source (neprc)0.500000
LOWER IN japanese source (clea)0.500000
callithrix jacchus0.500000
japanese source (clea)0.500000
LOWER IN new england source (neprc)0.500000
marmosets0.333333
boston0.333333
LOWER IN rectal swab0.333333
inflammatory bowel disease0.125000
LOWER IN inflammatory bowel disease0.125000
commonwealth of massachusetts0.111111
rectal swab0.062500
monkey0.055556
LOWER IN feces0.034483
captive0.032258
research facility0.005405
LOWER IN control0.004762
control0.004651
united states of america0.003448
feces0.002398
Fraction of annotations for the query sequences containing the term
TermScore
research facility1.000000
monkey1.000000
captive1.000000
callithrix jacchus1.000000
marmosets1.000000
rectal swab0.700000
feces0.300000
inflammatory bowel disease0.200000
LOWER IN inflammatory bowel disease0.200000
united states of america0.200000
commonwealth of massachusetts0.200000
boston0.200000
new england source (neprc)0.100000
LOWER IN japanese source (clea)0.100000
japanese source (clea)0.100000
LOWER IN new england source (neprc)0.100000
LOWER IN control0.100000
control0.100000
LOWER IN feces0.100000
LOWER IN rectal swab0.100000
Number of experiments associating the term to the sequence
TermScore
new england source (neprc)1.000000
LOWER IN japanese source (clea)1.000000
research facility1.000000
monkey1.000000
captive1.000000
callithrix jacchus1.000000
marmosets1.000000
rectal swab1.000000
japanese source (clea)1.000000
LOWER IN new england source (neprc)1.000000
feces1.000000
inflammatory bowel disease1.000000
LOWER IN control1.000000
control1.000000
LOWER IN inflammatory bowel disease1.000000
LOWER IN feces1.000000
united states of america1.000000
commonwealth of massachusetts1.000000
boston1.000000
LOWER IN rectal swab1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
978amnon high in feces compared to rectal swab in united states of america research facility commonwealth of massachusetts boston monkey captive callithrix jacchus marmosets 2022-12-24v41 / 1approvedNo
978amnon high in rectal swab compared to feces in united states of america research facility commonwealth of massachusetts boston monkey captive callithrix jacchus marmosets 2022-12-24v41 / 3approvedNo
978amnon high in control compared to inflammatory bowel disease inflammatory bowel disease in research facility monkey captive callithrix jacchus marmosets rectal swab 2022-12-24v41 / 16approvedNo
978amnon high in inflammatory bowel disease inflammatory bowel disease compared to control in research facility monkey captive callithrix jacchus marmosets rectal swab 2022-12-24v41 / 21approvedNo
978amnondominant feces, research facility, monkey, captive, callithrix jacchus, marmosets2022-12-24v41 / 23approvedNo
978amnondominant research facility, monkey, captive, callithrix jacchus, marmosets, rectal swab2022-12-24v41 / 24approvedNo
978amnoncommon feces, research facility, monkey, captive, callithrix jacchus, marmosets2022-12-24v41 / 60approvedNo
978amnoncommon research facility, monkey, captive, callithrix jacchus, marmosets, rectal swab2022-12-24v41 / 69approvedNo
978amnon high in japanese source (clea) compared to new england source (neprc) in research facility monkey captive callithrix jacchus marmosets rectal swab 2022-12-24v41 / 91approvedNo
978amnon high in new england source (neprc) compared to japanese source (clea) in research facility monkey captive callithrix jacchus marmosets rectal swab 2022-12-24v41 / 128approvedNo

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