dbBact

Experiment ID: 986

Field	Description
name	gut microbiota of the threatened takahē: biogeographic patterns and conservation implications
sra	prjna737580
doi	https://doi.org/10.1186/s42523-021-00158-5
datamd5	c37a41ed86d2f775819df10845830eb6
mapmd5	088d3c499529c044fb2362eed42ce520

Annotations for experiment:

term enrichment score

Term	Score
porphyrio hochstetteri	0.666667
takahe	0.666667
wild diet	0.333333
LOWER IN feed supplement diet	0.333333
feed supplement diet	0.333333
LOWER IN wild diet	0.333333
new zealand	0.250000
bird	0.111111
feces	0.004640

Fraction of dbbact annotations with this term covered by the query

Term	Score
wild diet	0.500000
LOWER IN feed supplement diet	0.500000
porphyrio hochstetteri	0.500000
takahe	0.500000
feed supplement diet	0.500000
LOWER IN wild diet	0.500000
new zealand	0.142857
bird	0.058824
feces	0.002326

Fraction of annotations for the query sequences containing the term

Term	Score
feces	1.000000
new zealand	1.000000
bird	1.000000
porphyrio hochstetteri	1.000000
takahe	1.000000
wild diet	0.250000
LOWER IN feed supplement diet	0.250000
feed supplement diet	0.250000
LOWER IN wild diet	0.250000

Number of experiments associating the term to the sequence

Term	Score
wild diet	1.000000
LOWER IN feed supplement diet	1.000000
feces	1.000000
new zealand	1.000000
bird	1.000000
porphyrio hochstetteri	1.000000
takahe	1.000000
feed supplement diet	1.000000
LOWER IN wild diet	1.000000

Exp. ID	User ID	Description	Date	Region	Sequences	Status	Flag
986	amnon	dominant feces, new zealand, bird, porphyrio hochstetteri, takahe	2022-12-26	v3	1 / 15	approved	No
986	amnon	high in feed supplement diet compared to wild diet in feces new zealand bird porphyrio hochstetteri takahe	2022-12-26	v3	1 / 40	approved	No
986	amnon	common feces, new zealand, bird, porphyrio hochstetteri, takahe	2022-12-26	v3	1 / 42	approved	No
986	amnon	high in wild diet compared to feed supplement diet in feces new zealand bird porphyrio hochstetteri takahe	2022-12-26	v3	1 / 118	approved	No

Problems / suggestions? Please visit the dbBact forum