Summary for ontology term: caecum

Number of annotations with term: 205

Annotations:

common ontology terms
term enrichment score
TermScore
caecum0.924685
chicken0.457638
gallus gallus0.457638
research facility0.212607
LOWER IN caecum0.208243
cecal content0.181622
mus musculus0.163847
state of texas0.156028
sus scrofa0.150171
pig0.150171
mouse0.139942
colon0.136204
broiler chicken0.120172
age 6 weeks0.116667
canada0.115942
free range chicken0.112554
united kingdom0.110749
rat0.110218
rattus norvegicus0.090566
ileum0.089385
province of alberta0.088889
age 35 weeks0.088889
united states of america0.086587
hen0.085106
age 30 days0.082380
LOWER IN ileum0.081958
control0.081356
ascending colon0.080717
farm0.080576
LOWER IN colon0.079797
rectum0.079121
male0.078764
sprague dawley0.078431
rex rabbit0.073733
age 35 days0.073733
age 9 months0.072398
wild0.072022
male organism0.070175
c57bl/60.068966
LOWER IN control0.068678
oryctolagus cuniculus0.068670
kingdom of spain0.068217
ovariectomy0.064965
china0.056897
female0.055398
LOWER IN duodenum0.055300
centrocercus urophasianus0.055300
greater sage-grouse0.055300
state of wyoming0.055300
cobb broiler chicken0.055300
state of maryland0.055300
nile tilapia0.055300
quail0.055300
coturnix coturnix0.055300
age 38 weeks0.055300
right colon0.054545
mucosa0.054545
fasting0.054545
tibet autonomous region0.053812
oreochromis niloticus0.053812
gastrointestinal system0.053097
charles river laboratories0.052402
hawaii0.051064
ovis aries0.049793
sichuan province0.047431
switzerland0.047431
duodenum0.046296
germany0.045977
bird0.045283
c57bl/6j0.045283
age 1 week0.044444
digesta0.041667
LOWER IN jejunum0.037795
dairy0.037559
LOWER IN left colon0.037559
left colon0.037559
jinzhou city prefecture0.037559
children0.037559
salmonellosis0.037559
salmonella enterica subsp. enterica serovar typhimurium0.037559
age 42 days0.037559
great britain0.037559
LOWER IN fasting0.037209
sigmoid colon0.036866
age 3 weeks0.036866
pika0.036866
ochotonidae0.036866
liverpool0.036866
terminal ileum0.036199
rattus0.034934
biopsy0.034335
horse0.033755
equus caballus0.033195
obsolete_juvenile stage0.032653
italy0.028881
jejunum0.028571
feral0.028436
age 15-20 weeks0.028436
age 5 weeks0.028436
tibetan pig0.028436
Fraction of dbbact annotations with this term covered by the query
TermScore
caecum0.970588
LOWER IN caecum0.941176
cecal content0.800000
LOWER IN broiler chicken0.666667
age 30 days0.666667
ruminant reticulum0.666667
omasum0.666667
rex rabbit0.666667
age 35 days0.666667
ovariectomy0.666667
chicken0.625000
gallus gallus0.625000
LOWER IN ileum0.615385
jejunum0.600000
LOWER IN jejunum0.600000
ileum0.533333
LOWER IN age 5 weeks0.500000
feral0.500000
age 15-20 weeks0.500000
broiler chicken0.500000
age 5 weeks0.500000
dairy0.500000
LOWER IN rumen0.500000
LOWER IN ruminant reticulum0.500000
LOWER IN omasum0.500000
LOWER IN esophagus0.500000
LOWER IN duodenum0.500000
LOWER IN transverse colon0.500000
LOWER IN left colon0.500000
transverse colon0.500000
left colon0.500000
jinzhou city prefecture0.500000
children0.500000
LOWER IN tibetan pig0.500000
LOWER IN tibetan swine0.500000
tibetan pig0.500000
tibetan swine0.500000
LOWER IN sus scrofa0.500000
LOWER IN infectious bronchitis virus0.500000
LOWER IN bronchitis0.500000
infectious bronchitis virus0.500000
bronchitis0.500000
lethbridge0.500000
age 9 months0.500000
LOWER IN ecuador0.500000
LOWER IN bolivia0.500000
LOWER IN mucosa0.500000
LOWER IN intestinal contents0.500000
LOWER IN ovariectomy0.500000
LOWER IN ovariectomized female0.500000
age 3 days0.500000
free range chicken0.500000
age 4 days0.500000
age 12 weeks0.500000
LOWER IN typhlitis0.500000
LOWER IN intestinal disease0.500000
typhlitis0.500000
intestinal disease0.500000
LOWER IN free range chicken0.500000
centrocercus urophasianus0.500000
greater sage-grouse0.500000
state of wyoming0.500000
LOWER IN age 30 days0.500000
LOWER IN high wellfare feed0.500000
high wellfare feed0.500000
cobb broiler chicken0.500000
LOWER IN salmonella enterica subsp. enterica serovar typhimurium0.500000
ascending colon0.500000
province of alberta0.500000
salmonellosis0.500000
salmonella enterica subsp. enterica serovar typhimurium0.500000
LOWER IN ascending colon0.500000
ovariectomized female0.500000
state of maryland0.500000
LOWER IN every other day fasting0.500000
every other day fasting0.500000
age 42 days0.500000
great britain0.500000
nile tilapia0.500000
quail0.500000
coturnix coturnix0.500000
age 35 weeks0.500000
mongolian sheep0.500000
LOWER IN cecal content0.500000
age 38 weeks0.500000
high capacity running strain0.500000
LOWER IN low capacity running strain0.500000
low capacity running strain0.500000
LOWER IN high capacity running strain0.500000
LOWER IN exercise0.500000
exercise0.500000
interferon gamma knockout0.500000
glucose tolerance0.500000
LOWER IN interferon gamma knockout0.500000
LOWER IN vaccination0.500000
LOWER IN salmune vaccination0.500000
salmune vaccination0.500000
age 14-28 days0.500000
LOWER IN feral0.500000
LOWER IN age 15-20 weeks0.500000
Fraction of annotations for the query sequences containing the term
TermScore
caecum0.882927
research facility0.531707
chicken0.360976
gallus gallus0.360976
united states of america0.331707
mus musculus0.224390
mouse0.195122
farm0.136585
LOWER IN caecum0.117073
china0.107317
sus scrofa0.107317
pig0.107317
kingdom of spain0.107317
state of texas0.107317
cecal content0.102439
control0.097561
canada0.097561
colon0.082927
united kingdom0.082927
male0.082927
rat0.078049
feces0.073171
LOWER IN control0.073171
broiler chicken0.068293
age 6 weeks0.068293
wild0.063415
female0.063415
free range chicken0.063415
rattus norvegicus0.058537
ileum0.048780
sprague dawley0.048780
male organism0.048780
province of alberta0.048780
c57bl/60.048780
germany0.048780
age 35 weeks0.048780
hen0.048780
age 30 days0.043902
rectum0.043902
LOWER IN colon0.043902
LOWER IN ileum0.043902
ascending colon0.043902
oryctolagus cuniculus0.039024
rex rabbit0.039024
age 35 days0.039024
age 9 months0.039024
ovariectomy0.034146
hawaii0.029268
ovis aries0.029268
gastrointestinal system0.029268
LOWER IN duodenum0.029268
right colon0.029268
sichuan province0.029268
tibet autonomous region0.029268
mucosa0.029268
bird0.029268
centrocercus urophasianus0.029268
greater sage-grouse0.029268
state of wyoming0.029268
switzerland0.029268
cobb broiler chicken0.029268
charles river laboratories0.029268
state of maryland0.029268
fasting0.029268
oreochromis niloticus0.029268
nile tilapia0.029268
quail0.029268
coturnix coturnix0.029268
age 38 weeks0.029268
c57bl/6j0.029268
duodenum0.024390
age 1 week0.024390
digesta0.024390
obsolete_juvenile stage0.019512
italy0.019512
dairy0.019512
LOWER IN left colon0.019512
left colon0.019512
LOWER IN jejunum0.019512
jinzhou city prefecture0.019512
terminal ileum0.019512
sigmoid colon0.019512
biopsy0.019512
children0.019512
homo sapiens0.019512
age 3 weeks0.019512
salmonellosis0.019512
salmonella enterica subsp. enterica serovar typhimurium0.019512
rattus0.019512
pika0.019512
ochotonidae0.019512
LOWER IN fasting0.019512
age 42 days0.019512
liverpool0.019512
great britain0.019512
adult0.019512
horse0.019512
equus caballus0.019512
feral0.014634
age 15-20 weeks0.014634
Exp. ID User ID Description Date Region Flag Sequences
14amnonhighest in the right colon ( high in right colon compared to caecum in mus musculus united states of america gastrointestinal system )2016-11-08v4No1 / 1
14amnonmuch higher in right and transverse colon compared to other GI tract ( high in right colon transverse colon compared to left colon caecum in mus musculus united states of america gastrointestinal system )2016-11-08v4No1 / 1
256amnonhigher in illeum compared to other gi tract locations in pigs ( high in ileum compared to duodenum jejunum caecum right colon left colon in sus scrofa pig united kingdom )2017-11-26v4No1 / 1
434amnon high in control diet compared to fructose diet fructose in rat rattus norvegicus sprague dawley feces caecum research facility switzerland 2018-12-20v4No1 / 1
124amnonhigher in interferon gamma knockout mice ( high in interferon gamma knockout compared to control united states of america in mus musculus mouse caecum feces c57bl/6j )2017-04-14v4No1 / 1
124amnonassociated with glucose tolerance (other mus musculus, mouse, caecum, feces, c57bl/6j, glucose tolerance)2017-04-14v4No1 / 1
604amnon high in infectious bronchitis virus bronchitis compared to control in caecum chicken gallus gallus cecal content china research facility 2020-04-06v3No1 / 2
186amnonlower in rats chronically infected with helminth ( high in control compared to parasitic helminthiasis infectious disease hymenolepis diminuta in rattus rat sprague dawley research facility caecum united states of america )2017-08-23v4No1 / 3
127amnonhigh in young (0-3 days) compared to old (28 day) chickens ( high in age young age compared to old age in gallus gallus chicken united states of america caecum )2017-04-14v4No1 / 3
495amnoncommon gallus gallus, chicken, caecum, broiler chicken, age 3 days, kingdom of spain, farm2019-03-03v4No1 / 4
25amnon high in antibiotic compared to control in oryctolagus cuniculus caecum rex rabbit sichuan province research facility 2016-12-01v4No1 / 5
186amnonhigher in rats chronically infected with helminth ( high in parasitic helminthiasis infectious disease hymenolepis diminuta compared to control in rattus rat sprague dawley research facility caecum united states of america )2017-08-23v4No1 / 5
300amnon high in exercise high physical activity compared to sedentary low physical activity in rat rattus norvegicus caecum female ovariectomy age 38 weeks united states of america research facility low capacity running strain 2018-02-27v4No1 / 5
495amnondominant gallus gallus, chicken, caecum, broiler chicken, kingdom of spain, farm, age 6 weeks2019-03-03v4No1 / 6
632amnondominant caecum, cecal content, adult, united states of america, state of texas, research facility, horse, equus caballus2020-06-10v4No1 / 7
108amnondominant state of texas, research facility, united states of america, caecum, oreochromis niloticus, nile tilapia2017-04-07v4No1 / 9
279amnondominant pika, ochotonidae, colon, caecum, china2018-01-24v4No1 / 10
808amnondominant caecum, digesta, germany, age 35 weeks, research facility, hen, chicken, gallus gallus2021-06-20v1No1 / 10
700amnon high in caecum compared to colon in control age 2 months belgium research facility sus scrofa pig 2028-04-01v3No1 / 10
386amnondominant mouse, mus musculus, caecum, wild, bolivia2018-10-28v4No1 / 11
264amnondominant oryctolagus cuniculus, rex rabbit, caecum, research facility, jiangsu province, china2017-12-11v4No1 / 11
808amnondominant caecum, mucosa, germany, age 35 weeks, research facility, hen, chicken, gallus gallus2021-06-20v1No1 / 11
495amnondominant gallus gallus, chicken, caecum, broiler chicken, age 3 days, kingdom of spain, farm2019-03-03v4No1 / 12
108amnoncommon state of texas, research facility, united states of america, caecum, oreochromis niloticus, nile tilapia2017-04-07v4No1 / 12
604amnondominant caecum, chicken, gallus gallus, cecal content, china, research facility2020-04-06v3No1 / 13
611amnon high in male compared to female in caecum mouse mus musculus canada research facility age 9 months cecal content 2020-04-21v4No1 / 13
108amnon high in colon compared to caecum in state of texas research facility united states of america mus musculus mouse 2017-04-07v4No1 / 13
386amnondominant mouse, mus musculus, caecum, wild, ecuador2018-10-28v4No1 / 14
186amnondominant rattus, rat, sprague dawley, research facility, caecum, united states of america2017-08-23v4No1 / 14
622amnondominant caecum, age 42 days, research facility, liverpool, great britain, chicken, gallus gallus2020-05-08v4No1 / 14
456amnon high in tongue compared to caecum in mus musculus mouse research facility united states of america c57bl/6 female 2019-01-10v4No1 / 14
25amnon high in compared to in oryctolagus cuniculus caecum rex rabbit sichuan province research facility 2016-12-01v4No1 / 15
25amnon high in control compared to antibiotic in oryctolagus cuniculus caecum rex rabbit sichuan province research facility 2016-12-01v4No1 / 15
456amnondominant mus musculus, mouse, research facility, united states of america, c57bl/6, female, caecum2019-01-10v4No1 / 15
300amnondominant rat, rattus norvegicus, caecum, female, ovariectomy, age 38 weeks, united states of america, research facility2018-02-27v4No1 / 15
363amnondominant ovis aries, age 30 days, obsolete_juvenile stage, italy, dairy, caecum, colon, rectum2018-08-29v4No1 / 16
19amnonhigh freq in biopsies of children (IBD study) (dominant rectum, terminal ileum, sigmoid colon, caecum, colon, biopsy, children, homo sapiens, united states of america)2016-11-14v4No1 / 16
314amnondominant caecum, cecal content, tibet autonomous region, farm, tibetan pig, tibetan swine, china2018-04-10v4No1 / 16
604amnon high in control compared to infectious bronchitis virus bronchitis in caecum chicken gallus gallus cecal content china research facility 2020-04-06v3No1 / 16
495amnondominant gallus gallus, chicken, caecum, kingdom of spain, farm, free range chicken, age 6 weeks2019-03-03v4No1 / 16
738amnon high in high wellfare feed compared to standard feed in caecum age 1 week united kingdom chicken gallus gallus 2021-01-30v3No1 / 16
434amnon high in fructose diet fructose compared to control diet in rat rattus norvegicus sprague dawley feces caecum research facility switzerland 2018-12-20v4No1 / 16
776amnondominant caecum, broiler chicken, research facility, captive, age 5 weeks, gallus gallus, chicken, hawaii2021-04-25v3No1 / 17
386amnondominant mouse, mus musculus, caecum, wild, brazil2018-10-28v4No1 / 17
611amnondominant caecum, mouse, mus musculus, canada, research facility, age 9 months, cecal content2020-04-21v4No1 / 17
673amnondominant caecum, ascending colon, salmonellosis, salmonella enterica subsp. enterica serovar typhimurium, research facility, age 6 weeks, male, male organism, province of alberta, canada, pig, sus scrofa2020-09-28v4No1 / 17
108amnonincreases during fasting in nile tilapia caecum ( high in fasting late timepoints compared to early timepoints in state of texas research facility united states of america caecum oreochromis niloticus nile tilapia )2017-04-07v4No1 / 17
300amnon high in sedentary low physical activity compared to exercise high physical activity in rat rattus norvegicus caecum female ovariectomy age 38 weeks united states of america research facility low capacity running strain 2018-02-27v4No1 / 17
780amnondominant caecum, jinzhou city prefecture, china, research facility, chicken, gallus gallus2021-04-28v3No1 / 18
495amnondominant gallus gallus, chicken, caecum, kingdom of spain, farm, free range chicken, age 8 weeks2019-03-03v4No1 / 18
256amnondominant sus scrofa, pig, caecum, right colon, left colon, united kingdom2017-11-26v4No1 / 19
495amnondominant gallus gallus, chicken, caecum, broiler chicken, kingdom of spain, farm, age 4 weeks2019-03-03v4No1 / 19
738amnondominant caecum, age 30 days, united kingdom, chicken, gallus gallus2021-01-30v3No1 / 19
108amnonincreases during fasting in mouse caecum ( high in fasting late timepoints compared to early timepoints in state of texas research facility united states of america caecum mus musculus mouse )2017-04-07v4No1 / 19
495amnondominant gallus gallus, chicken, caecum, kingdom of spain, farm, free range chicken, age 4 days2019-03-03v4No1 / 20
434amnondominant rat, rattus norvegicus, sprague dawley, feces, caecum, research facility, switzerland2018-12-20v4No1 / 20
744amnondominant caecum, research facility, age 35 days, cobb broiler chicken, male, gallus gallus, chicken2021-02-21v3No1 / 21
108amnondominant state of texas, research facility, united states of america, caecum, mus musculus, mouse2017-04-07v4No1 / 21
108amnondominant quail, state of texas, research facility, united states of america, caecum, coturnix coturnix2017-04-07v4No1 / 21
124amnondominant mus musculus, mouse, caecum, feces, c57bl/6j, united states of america2017-04-14v4No1 / 21
611amnon high in control compared to ovariectomy ovariectomized female in caecum mouse mus musculus canada research facility age 9 months cecal content female 2020-04-21v4No1 / 22
673amnondominant caecum, control, ascending colon, research facility, age 6 weeks, male, male organism, province of alberta, canada, pig, sus scrofa2020-09-28v4No1 / 22
611amnon high in ovariectomy ovariectomized female compared to control in caecum mouse mus musculus canada research facility age 9 months cecal content female 2020-04-21v4No1 / 22
314amnondominant caecum, cecal content, tibet autonomous region, farm, sus scrofa, pig, china2018-04-10v4No1 / 23
738amnondominant caecum, age 1 week, united kingdom, chicken, gallus gallus2021-01-30v3No1 / 23
447amnondominant mus musculus, mouse, caecum, c57bl/6, research facility, charles river laboratories, united states of america, state of maryland2019-01-08v4No1 / 24
447amnondominant mus musculus, mouse, caecum, c57bl/6, research facility, charles river laboratories, united states of america, state of maryland, fasting, every other day fasting2019-01-08v4No1 / 24
756amnondominant caecum, lethbridge, age 35 days, canada, broiler chicken, research facility, gallus gallus, chicken2021-03-22v4No1 / 24
13amnon high in esophagus stomach duodenum ileum mouth compared to caecum colon rectum feces in mus musculus united states of america gastrointestinal system 2016-11-08v4No1 / 25
673amnon high in salmonellosis salmonella enterica subsp. enterica serovar typhimurium compared to control in caecum ascending colon research facility age 6 weeks male male organism province of alberta canada pig sus scrofa 2020-09-28v4No1 / 25
776amnondominant caecum, wild, feral, age 15-20 weeks, gallus gallus, chicken, hawaii2021-04-25v3No1 / 26
558amnondominant caecum, bird, centrocercus urophasianus, greater sage-grouse, united states of america, state of wyoming2019-09-20v4No1 / 26
495amnondominant gallus gallus, chicken, caecum, kingdom of spain, farm, free range chicken, age 3 weeks2019-03-03v4No1 / 27
495amnondominant gallus gallus, chicken, caecum, kingdom of spain, farm, free range chicken, age 12 weeks2019-03-03v4No1 / 27
495amnondominant gallus gallus, chicken, caecum, broiler chicken, kingdom of spain, farm, age 2 weeks2019-03-03v4No1 / 28
738amnon high in high wellfare feed compared to standard feed in caecum age 30 days united kingdom chicken gallus gallus 2021-01-30v3No1 / 28
127amnondominant gallus gallus, chicken, united states of america, caecum, age 14-28 days2017-04-14v4No1 / 28
673amnon high in salmonellosis salmonella enterica subsp. enterica serovar typhimurium compared to control in caecum ascending colon research facility age 6 weeks male male organism province of alberta canada pig sus scrofa 2020-09-28v4No1 / 29
622amnon high in ileum compared to caecum in age 42 days research facility liverpool great britain chicken gallus gallus 2020-05-08v4No1 / 29
108amnondecreases during fasting in mouse caecum ( high in early timepoints compared to fasting late timepoints in state of texas research facility united states of america caecum mus musculus mouse )2017-04-07v4No1 / 29
673amnon high in ileum compared to caecum ascending colon in control research facility age 6 weeks male male organism province of alberta canada pig sus scrofa 2020-09-28v4No1 / 31
611amnon high in female compared to male in caecum mouse mus musculus canada research facility age 9 months cecal content 2020-04-21v4No1 / 33
108amnonincreases during fasting in quail caecum ( high in fasting late timepoints compared to early timepoints in quail state of texas research facility united states of america caecum coturnix coturnix )2017-04-07v4No1 / 33
19amnonhigher in CD compared to control in biopsies ( high in crohn's disease compared to control in rectum terminal ileum sigmoid colon caecum colon biopsy children homo sapiens united states of america )2016-11-14v4No1 / 34
127amnonhigher in vaccinated chickens ( high in vaccination salmune vaccination compared to control in gallus gallus chicken united states of america caecum )2017-04-14v4No1 / 34
19amnoncommon in biopsies of children (IBD study) (common rectum, terminal ileum, sigmoid colon, caecum, colon, biopsy, children, homo sapiens, united states of america)2016-11-14v4No1 / 40
14amnon high in stomach duodenum jejunum ileum compared to caecum right colon transverse colon left colon feces in mus musculus united states of america gastrointestinal system 2016-11-08v4No1 / 42
738amnon high in standard feed compared to high wellfare feed in caecum age 1 week united kingdom chicken gallus gallus 2021-01-30v3No1 / 43
738amnon high in standard feed compared to high wellfare feed in caecum age 30 days united kingdom chicken gallus gallus 2021-01-30v3No1 / 45
611amnonhigher in feces of mice exposed to cigarette smoke for 6 months compared to controls ( high in nicotine dependence compared to control in caecum mouse mus musculus canada research facility age 9 months cecal content )2020-04-21v4No1 / 45
300amnon high in high capacity running strain compared to low capacity running strain in rat rattus norvegicus caecum female ovariectomy age 38 weeks united states of america research facility 2018-02-27v4No1 / 45
495amnon high in typhlitis disease intestinal disease compared to control in gallus gallus chicken caecum kingdom of spain farm free range chicken 2019-03-03v4No1 / 48
256amnonlower in intestinal contents compared to mucosal scraping in pig caecum ( high in mucosa compared to intestinal contents in sus scrofa pig caecum united kingdom )2017-11-26v4No1 / 50
14amnon high in caecum right colon transverse colon left colon feces compared to stomach duodenum jejunum ileum in mus musculus united states of america gastrointestinal system 2016-11-08v4No1 / 51
127amnoncommon gallus gallus, chicken, united states of america, caecum, age 14-28 days2017-04-14v4No1 / 51
300amnon high in low capacity running strain compared to high capacity running strain in rat rattus norvegicus caecum female ovariectomy age 38 weeks united states of america research facility 2018-02-27v4No1 / 52
279amnon high in small intestine stomach compared to caecum colon in pika ochotonidae china 2018-01-24v4No1 / 53
700amnon high in colon compared to caecum in control age 2 months belgium research facility sus scrofa pig 2028-04-01v3No1 / 59
558amnon high in duodenum compared to caecum in bird centrocercus urophasianus greater sage-grouse united states of america state of wyoming 2019-09-20v4No1 / 64
738amnoncommon caecum, age 1 week, united kingdom, chicken, gallus gallus2021-01-30v3No1 / 64
611amnonlower in feces of mice exposed to cigarette smoke for 6 months compared to controls ( high in control compared to nicotine dependence in caecum mouse mus musculus canada research facility age 9 months cecal content )2020-04-21v4No1 / 66
738amnon high in age 1 week compared to age 30 days in caecum united kingdom chicken gallus gallus 2021-01-30v3No1 / 68
495amnoncommon gallus gallus, chicken, caecum, kingdom of spain, farm, free range chicken, age 4 days2019-03-03v4No1 / 69
386amnon high in ecuador compared to bolivia in mouse mus musculus caecum wild 2018-10-28v4No1 / 70
744amnon high in cloaca compared to caecum in research facility age 35 days cobb broiler chicken male gallus gallus chicken 2021-02-21v3No1 / 70
127amnonhigher in non-vaccinated chickens ( high in control compared to vaccination salmune vaccination in gallus gallus chicken united states of america caecum )2017-04-14v4No1 / 72
108amnondecreases during fasting in quail caecum ( high in early timepoints compared to fasting late timepoints in quail state of texas research facility united states of america caecum coturnix coturnix )2017-04-07v4No1 / 76
434amnonhigher in antibiotics treated rats compared to controls ( high in antibiotic neomycin ampicillin compared to control in rat rattus norvegicus sprague dawley feces caecum research facility switzerland )2018-12-20v4No1 / 80
108amnon high in caecum compared to colon in state of texas research facility united states of america oreochromis niloticus nile tilapia 2017-04-07v4No1 / 80
108amnon high in caecum compared to colon in state of texas research facility united states of america mus musculus mouse 2017-04-07v4No1 / 86
673amnon high in control compared to salmonellosis salmonella enterica subsp. enterica serovar typhimurium in caecum ascending colon research facility age 6 weeks male male organism province of alberta canada pig sus scrofa 2020-09-28v4No1 / 88
386amnoncommon mouse, mus musculus, caecum, wild, ecuador2018-10-28v4No1 / 90
495amnon high in broiler chicken compared to free range chicken in gallus gallus chicken caecum kingdom of spain farm age 3 weeks 2019-03-03v4No1 / 90
447amnonlower in mice with evert other day fasting compared to controls ( high in control compared to fasting every other day fasting in mus musculus mouse caecum c57bl/6 research facility charles river laboratories united states of america state of maryland )2019-01-08v4No1 / 92
363amnoncommon ovis aries, age 30 days, obsolete_juvenile stage, italy, dairy, caecum, colon, rectum2018-08-29v4No1 / 94
558amnon high in colon compared to caecum in bird centrocercus urophasianus greater sage-grouse united states of america state of wyoming 2019-09-20v4No1 / 97
127amnonhigh in old (14-28 days) compared to young (0-3 day) chickens ( high in age old age compared to young age in gallus gallus chicken united states of america caecum )2017-04-14v4No1 / 98
673amnoncommon caecum, ascending colon, salmonellosis, salmonella enterica subsp. enterica serovar typhimurium, research facility, age 6 weeks, male, male organism, province of alberta, canada, pig, sus scrofa2020-09-28v4No1 / 99
124amnonhigher in ifn-gamma knockout comapred to wt ( high in interferon gamma knockout compared to control in mus musculus mouse caecum feces c57bl/6j united states of america )2017-04-14v4No1 / 100
363amnon high in caecum colon rectum compared to rumen ruminant reticulum omasum in ovis aries age 30 days obsolete_juvenile stage italy dairy 2018-08-29v4No1 / 101
256amnonhigher in intestinal contents compared to mucosal scraping in pig caecum ( high in intestinal contents compared to mucosa in sus scrofa pig caecum united kingdom )2017-11-26v4No1 / 103
108amnon high in colon compared to caecum in state of texas research facility united states of america oreochromis niloticus nile tilapia 2017-04-07v4No1 / 103
673amnon high in control compared to salmonellosis salmonella enterica subsp. enterica serovar typhimurium in caecum ascending colon research facility age 6 weeks male male organism province of alberta canada pig sus scrofa 2020-09-28v4No1 / 104
447amnonhigher in mice with evert other day fasting compared to controls ( high in fasting every other day fasting compared to control in mus musculus mouse caecum c57bl/6 research facility charles river laboratories united states of america state of maryland )2019-01-08v4No1 / 106
776amnon high in feral wild age 15-20 weeks compared to age 5 weeks research facility broiler chicken captive in caecum hawaii chicken gallus gallus 2021-04-25v3No1 / 107
744amnon high in ileum compared to caecum in research facility age 35 days cobb broiler chicken male gallus gallus chicken 2021-02-21v3No1 / 121
124amnonlower in ifn-gamma knockout comapred to wt ( high in control compared to interferon gamma knockout in mus musculus mouse caecum feces c57bl/6j united states of america )2017-04-14v4No1 / 121
386amnonnegatively correlated with altitude (0-4km) in house mouse caecum ( high in low altitude compared to high altitude in mouse mus musculus caecum wild south america )2018-10-28v4No1 / 122
108amnondecreases during fasting in nile tilapia caecum ( high in early timepoints compared to fasting late timepoints in state of texas research facility united states of america caecum oreochromis niloticus nile tilapia )2017-04-07v4No1 / 122
386amnoncommon mouse, mus musculus, caecum, wild, bolivia2018-10-28v4No1 / 129
495amnoncommon gallus gallus, chicken, caecum, broiler chicken, kingdom of spain, farm, age 2 weeks2019-03-03v4No1 / 134
314amnon high in sus scrofa pig compared to tibetan pig tibetan swine in caecum cecal content tibet autonomous region farm china 2018-04-10v4No1 / 136
744amnoncommon caecum, research facility, age 35 days, cobb broiler chicken, male, gallus gallus, chicken2021-02-21v3No1 / 141
611amnoncommon caecum, mouse, mus musculus, canada, research facility, age 9 months, cecal content2020-04-21v4No1 / 145
279amnoncommon pika, ochotonidae, colon, caecum, china2018-01-24v4No1 / 146
300amnoncommon rat, rattus norvegicus, caecum, female, ovariectomy, age 38 weeks, united states of america, research facility2018-02-27v4No1 / 150
780amnon high in jejunum duodenum small intestine compared to caecum in jinzhou city prefecture china research facility chicken gallus gallus 2021-04-28v3No1 / 153
673amnoncommon caecum, control, ascending colon, research facility, age 6 weeks, male, male organism, province of alberta, canada, pig, sus scrofa2020-09-28v4No1 / 154
558amnoncommon caecum, bird, centrocercus urophasianus, greater sage-grouse, united states of america, state of wyoming2019-09-20v4No1 / 155
314amnon high in tibetan pig tibetan swine compared to sus scrofa pig in caecum cecal content tibet autonomous region farm china 2018-04-10v4No1 / 157
108amnon high in colon compared to caecum in quail state of texas research facility united states of america coturnix coturnix 2017-04-07v4No1 / 157
25amnon high in control compared to antibiotic in oryctolagus cuniculus caecum rex rabbit sichuan province research facility 2016-12-01v4No1 / 163
456amnoncommon mus musculus, mouse, research facility, united states of america, c57bl/6, female, caecum2019-01-10v4No1 / 167
604amnoncommon caecum, chicken, gallus gallus, cecal content, china, research facility2020-04-06v3No1 / 185
495amnoncommon gallus gallus, chicken, caecum, broiler chicken, kingdom of spain, farm, age 4 weeks2019-03-03v4No1 / 185
744amnon high in caecum compared to cloaca in research facility age 35 days cobb broiler chicken male gallus gallus chicken 2021-02-21v3No1 / 187
386amnoncommon mouse, mus musculus, caecum, wild, brazil2018-10-28v4No1 / 189
495amnoncommon gallus gallus, chicken, caecum, kingdom of spain, farm, free range chicken, age 8 weeks2019-03-03v4No1 / 189
776amnoncommon caecum, wild, feral, age 15-20 weeks, gallus gallus, chicken, hawaii2021-04-25v3No1 / 191
495amnon high in free range chicken compared to broiler chicken in gallus gallus chicken caecum kingdom of spain farm age 3 weeks 2019-03-03v4No1 / 199
738amnoncommon caecum, age 30 days, united kingdom, chicken, gallus gallus2021-01-30v3No1 / 202
495amnoncommon gallus gallus, chicken, caecum, broiler chicken, kingdom of spain, farm, age 6 weeks2019-03-03v4No1 / 210
780amnon high in caecum compared to jejunum duodenum small intestine in jinzhou city prefecture china research facility chicken gallus gallus 2021-04-28v3No1 / 212
495amnoncommon gallus gallus, chicken, caecum, kingdom of spain, farm, free range chicken, age 12 weeks2019-03-03v4No1 / 214
108amnoncommon quail, state of texas, research facility, united states of america, caecum, coturnix coturnix2017-04-07v4No1 / 216
808amnon high in ileum compared to caecum in digesta germany age 35 weeks research facility hen chicken gallus gallus 2021-06-20v1No1 / 224
673amnon high in caecum ascending colon compared to ileum in control research facility age 6 weeks male male organism province of alberta canada pig sus scrofa 2020-09-28v4No1 / 228
25amnon high in antibiotic compared to control in oryctolagus cuniculus caecum rex rabbit sichuan province research facility 2016-12-01v4No1 / 231
495amnoncommon gallus gallus, chicken, caecum, kingdom of spain, farm, free range chicken, age 3 weeks2019-03-03v4No1 / 236
434amnonlower in antibiotics treated rats compared to controls ( high in control compared to antibiotic neomycin ampicillin in rat rattus norvegicus sprague dawley feces caecum research facility switzerland )2018-12-20v4No1 / 238
434amnoncommon rat, rattus norvegicus, sprague dawley, feces, caecum, research facility, switzerland2018-12-20v4No1 / 238
108amnoncommon state of texas, research facility, united states of america, caecum, mus musculus, mouse2017-04-07v4No1 / 241
622amnoncommon caecum, age 42 days, research facility, liverpool, great britain, chicken, gallus gallus2020-05-08v4No1 / 244
386amnon high in bolivia compared to ecuador in mouse mus musculus caecum wild 2018-10-28v4No1 / 246
776amnon high in broiler chicken captive research facility age 5 weeks compared to wild feral age 15-20 weeks in caecum gallus gallus chicken hawaii 2021-04-25v3No1 / 252
386amnonpositively correlated with altitude (0-4km) in house mouse caecum ( high in high altitude compared to low altitude in mouse mus musculus caecum wild south america )2018-10-28v4No1 / 255
808amnon high in digesta compared to mucosa in caecum germany age 35 weeks research facility hen chicken gallus gallus 2021-06-20v1No1 / 266
744amnon high in caecum compared to ileum in research facility age 35 days cobb broiler chicken male gallus gallus chicken 2021-02-21v3No1 / 286
495amnoncommon gallus gallus, chicken, caecum, kingdom of spain, farm, free range chicken, age 6 weeks2019-03-03v4No1 / 290
780amnoncommon caecum, jinzhou city prefecture, china, research facility, chicken, gallus gallus2021-04-28v3No1 / 294
111amnon high in rumen ruminant reticulum omasum compared to rectum ileum caecum colon in mongolian sheep ovis aries china 2017-04-09v4No1 / 294
622amnon high in caecum compared to ileum in age 42 days research facility liverpool great britain chicken gallus gallus 2020-05-08v4No1 / 307
13amnon high in caecum colon rectum feces compared to esophagus stomach duodenum ileum mouth in mus musculus united states of america gastrointestinal system 2016-11-08v4No1 / 316
756amnoncommon caecum, lethbridge, age 35 days, canada, broiler chicken, research facility, gallus gallus, chicken2021-03-22v4No1 / 321
447amnoncommon mus musculus, mouse, caecum, c57bl/6, research facility, charles river laboratories, united states of america, state of maryland, fasting, every other day fasting2019-01-08v4No1 / 328
456amnon high in caecum compared to tongue in mus musculus mouse research facility united states of america c57bl/6 female 2019-01-10v4No1 / 338
124amnoncommon mus musculus, mouse, caecum, feces, c57bl/6j, united states of america2017-04-14v4No1 / 339
776amnoncommon caecum, broiler chicken, research facility, captive, age 5 weeks, gallus gallus, chicken, hawaii2021-04-25v3No1 / 343
447amnoncommon mus musculus, mouse, caecum, c57bl/6, research facility, charles river laboratories, united states of america, state of maryland2019-01-08v4No1 / 343
558amnon high in caecum compared to colon in bird centrocercus urophasianus greater sage-grouse united states of america state of wyoming 2019-09-20v4No1 / 359
363amnon high in rumen ruminant reticulum omasum compared to caecum colon rectum in ovis aries age 30 days obsolete_juvenile stage italy dairy 2018-08-29v4No1 / 360
108amnon high in caecum compared to colon in quail state of texas research facility united states of america coturnix coturnix 2017-04-07v4No1 / 380
256amnonhigher in small intestine compared to colon in pigs ( high in duodenum jejunum ileum compared to caecum right colon left colon in sus scrofa pig united kingdom )2017-11-26v4No1 / 387
314amnoncommon caecum, cecal content, tibet autonomous region, farm, sus scrofa, pig, china2018-04-10v4No1 / 402
808amnoncommon caecum, digesta, germany, age 35 weeks, research facility, hen, chicken, gallus gallus2021-06-20v1No1 / 406
186amnoncommon rattus, rat, sprague dawley, research facility, caecum, united states of america2017-08-23v4No1 / 407
495amnon high in control compared to typhlitis disease intestinal disease in gallus gallus chicken caecum kingdom of spain farm free range chicken 2019-03-03v4No1 / 412
808amnoncommon caecum, mucosa, germany, age 35 weeks, research facility, hen, chicken, gallus gallus2021-06-20v1No1 / 446
19amnonhigher in controls compared to CD in biopsies ( high in control compared to crohn's disease in rectum terminal ileum sigmoid colon caecum colon biopsy children homo sapiens united states of america )2016-11-14v4No1 / 459
111amnon high in rectum caecum ileum colon compared to rumen ruminant reticulum omasum in mongolian sheep ovis aries china 2017-04-09v4No1 / 464
314amnoncommon caecum, cecal content, tibet autonomous region, farm, tibetan pig, tibetan swine, china2018-04-10v4No1 / 467
738amnon high in age 30 days compared to age 1 week in caecum united kingdom chicken gallus gallus 2021-01-30v3No1 / 474
558amnon high in caecum compared to duodenum in bird centrocercus urophasianus greater sage-grouse united states of america state of wyoming 2019-09-20v4No1 / 488
256amnoncommon sus scrofa, pig, caecum, right colon, left colon, united kingdom2017-11-26v4No1 / 490
808amnon high in ileum compared to caecum in mucosa germany age 35 weeks research facility hen chicken gallus gallus 2021-06-20v1No1 / 587
264amnoncommon oryctolagus cuniculus, rex rabbit, caecum, research facility, jiangsu province, china2017-12-11v4No1 / 622
279amnon high in caecum colon compared to stomach small intestine in pika ochotonidae china 2018-01-24v4No1 / 634
25amnoncommon oryctolagus cuniculus, caecum, rex rabbit, sichuan province, research facility2016-12-01v4No1 / 669
808amnon high in mucosa compared to digesta in caecum germany age 35 weeks research facility hen chicken gallus gallus 2021-06-20v1No1 / 701
256amnonlower in small intestine compared to colon in pigs ( high in caecum right colon left colon compared to duodenum jejunum ileum in sus scrofa pig united kingdom )2017-11-26v4No1 / 740
632amnon high in feces compared to caecum cecal content in adult united states of america state of texas research facility horse equus caballus 2020-06-10v4No1 / 897
632amnoncommon caecum, cecal content, adult, united states of america, state of texas, research facility, horse, equus caballus2020-06-10v4No1 / 914
632amnon high in caecum cecal content compared to feces in adult united states of america state of texas research facility horse equus caballus 2020-06-10v4No1 / 943
808amnon high in caecum compared to ileum in digesta germany age 35 weeks research facility hen chicken gallus gallus 2021-06-20v1No1 / 1776
808amnon high in caecum compared to ileum in mucosa germany age 35 weeks research facility hen chicken gallus gallus 2021-06-20v1No1 / 2147

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