Summary for ontology term: indian subcontinent

Number of annotations with term: 58

Annotations:

common ontology terms
term enrichment score
TermScore
india0.561151
nepal0.439306
himalayas0.275000
koshi river0.216216
new delhi0.171429
depth 10 cm0.163265
bangladesh0.147059
infant0.144928
rural community0.130952
midwest region0.121212
tributary0.121212
age 130.121212
bihar state0.121212
filtered 2.7um0.108108
particle bound0.108108
river0.103896
free floating0.097561
filtered 0.2um0.097561
juvenile organism0.097561
vellore district0.093750
tharu0.093750
agrarian0.093750
chepang0.093750
forager0.089552
obsolete_juvenile stage0.081633
small intestine0.078947
age 2 months0.078947
age < 1 year0.075949
homo sapiens0.075586
fresh water0.070796
duodenum0.065934
sri lanka0.064516
age 1-18 years0.064516
raji0.064516
raute0.064516
feces0.058658
diarrhea0.054054
city0.052174
adult0.047001
age0.040000
age 25-50 years0.033333
LOWER IN age 25-50 years0.033333
age 0-10.033333
LOWER IN age 1-20.033333
age 1-20.033333
LOWER IN age 0-10.033333
LOWER IN india0.033333
LOWER IN nepal0.033333
LOWER IN himalayas0.033333
LOWER IN forager0.033333
LOWER IN chepang0.033333
LOWER IN tharu0.033333
LOWER IN agrarian0.033333
visceral leishmaniasis0.033333
LOWER IN visceral leishmaniasis0.033333
LOWER IN age 50-80 years0.032787
probiotics0.032258
LOWER IN diarrhea0.032258
LOWER IN finland0.032258
water0.032129
age 50-80 years0.031746
LOWER IN small intestine0.031250
LOWER IN rural community0.031250
LOWER IN age &lt; 1 year0.031250
finland0.030769
LOWER IN infant0.029851
LOWER IN duodenum0.029412
LOWER IN united states of america0.029412
pathogen0.028169
LOWER IN control0.026549
LOWER IN feces0.025316
LOWER IN adult0.024691
control0.017621
united states of america0.015256
Fraction of dbbact annotations with this term covered by the query
TermScore
india0.750000
nepal0.666667
midwest region0.500000
age 25-50 years0.500000
LOWER IN age 25-50 years0.500000
age 0-10.500000
LOWER IN age 1-20.500000
age 1-20.500000
LOWER IN age 0-10.500000
tributary0.500000
koshi river0.500000
new delhi0.500000
sri lanka0.500000
age 1-18 years0.500000
vellore district0.500000
bangladesh0.500000
LOWER IN india0.500000
age 130.500000
LOWER IN nepal0.500000
LOWER IN himalayas0.500000
himalayas0.500000
tharu0.500000
agrarian0.500000
LOWER IN forager0.500000
LOWER IN chepang0.500000
chepang0.500000
LOWER IN tharu0.500000
LOWER IN agrarian0.500000
raji0.500000
raute0.500000
visceral leishmaniasis0.500000
bihar state0.500000
LOWER IN visceral leishmaniasis0.500000
LOWER IN age 50-80 years0.333333
forager0.333333
filtered 2.7um0.250000
particle bound0.250000
probiotics0.250000
LOWER IN diarrhea0.250000
LOWER IN finland0.250000
age 50-80 years0.200000
depth 10 cm0.200000
free floating0.166667
filtered 0.2um0.166667
small intestine0.166667
LOWER IN small intestine0.166667
age 2 months0.166667
juvenile organism0.166667
LOWER IN rural community0.166667
LOWER IN age &lt; 1 year0.166667
finland0.142857
age < 1 year0.142857
infant0.125000
diarrhea0.125000
LOWER IN infant0.111111
LOWER IN duodenum0.100000
obsolete_juvenile stage0.100000
rural community0.100000
LOWER IN united states of america0.100000
duodenum0.090909
river0.083333
pathogen0.076923
city0.052632
age0.047619
fresh water0.047619
LOWER IN feces0.047619
LOWER IN adult0.043478
homo sapiens0.039526
feces0.030508
adult0.025316
water0.018182
LOWER IN control0.017857
control0.011834
united states of america0.008368
Fraction of annotations for the query sequences containing the term
TermScore
homo sapiens0.862069
feces0.758621
india0.448276
adult0.327586
nepal0.327586
himalayas0.189655
rural community0.189655
infant0.172414
river0.137931
water0.137931
fresh water0.137931
depth 10 cm0.137931
koshi river0.137931
new delhi0.103448
united states of america0.086207
bangladesh0.086207
midwest region0.068966
tributary0.068966
filtered 2.7um0.068966
particle bound0.068966
free floating0.068966
filtered 0.2um0.068966
juvenile organism0.068966
obsolete_juvenile stage0.068966
age 130.068966
bihar state0.068966
small intestine0.051724
duodenum0.051724
LOWER IN control0.051724
city0.051724
vellore district0.051724
age 2 months0.051724
tharu0.051724
agrarian0.051724
forager0.051724
chepang0.051724
age < 1 year0.051724
age0.034483
sri lanka0.034483
age 1-18 years0.034483
diarrhea0.034483
control0.034483
raji0.034483
raute0.034483
age 25-50 years0.017241
LOWER IN age 50-80 years0.017241
age 50-80 years0.017241
LOWER IN age 25-50 years0.017241
age 0-10.017241
LOWER IN age 1-20.017241
age 1-20.017241
LOWER IN age 0-10.017241
LOWER IN small intestine0.017241
LOWER IN duodenum0.017241
LOWER IN feces0.017241
probiotics0.017241
pathogen0.017241
LOWER IN diarrhea0.017241
finland0.017241
LOWER IN india0.017241
LOWER IN finland0.017241
LOWER IN nepal0.017241
LOWER IN himalayas0.017241
LOWER IN rural community0.017241
LOWER IN united states of america0.017241
LOWER IN forager0.017241
LOWER IN chepang0.017241
LOWER IN tharu0.017241
LOWER IN agrarian0.017241
LOWER IN adult0.017241
LOWER IN infant0.017241
LOWER IN age &lt; 1 year0.017241
visceral leishmaniasis0.017241
LOWER IN visceral leishmaniasis0.017241
Exp. ID User ID Description Date Region Flag Sequences
121amnoncausitive agent for acute diarrhea (other feces, homo sapiens, pathogen, bangladesh, diarrhea)2017-04-13v4No1 / 1
570amnon high in visceral leishmaniasis compared to control in feces homo sapiens india bihar state 2019-12-16v3No1 / 4
332amnonhigher in infants treated with Lactobacillus rhamnosus GG probiotics compared to non-treated ( high in probiotics compared to control in homo sapiens city infant vellore district age 2 months india )2018-05-14v4No1 / 5
332amnoncommon homo sapiens, city, infant, vellore district, age 2 months, india2018-05-14v4No1 / 8
332amnondominant homo sapiens, city, infant, vellore district, age 2 months, india2018-05-14v4No1 / 9
534amnondominant river, water, fresh water, nepal, free floating, depth 10 cm, filtered 0.2um, koshi river2019-07-22v4No1 / 10
534amnondominant river, tributary, water, fresh water, nepal, free floating, depth 10 cm, filtered 0.2um, koshi river2019-07-22v4No1 / 13
477amnondominant feces, homo sapiens, adult, nepal, himalayas, rural community, tharu, agrarian2019-01-28v4No1 / 14
339amnondominant feces, homo sapiens, infant, age < 1 year, india2018-05-24v4No1 / 15
570amnondominant feces, homo sapiens, india, bihar state2019-12-16v3No1 / 15
534amnondominant river, tributary, water, fresh water, nepal, depth 10 cm, filtered 2.7um, particle bound, koshi river2019-07-22v4No1 / 16
534amnondominant river, water, fresh water, nepal, depth 10 cm, filtered 2.7um, particle bound, koshi river2019-07-22v4No1 / 16
352amnondominant feces, homo sapiens, new delhi, india2018-07-30v4No1 / 16
656amnondominant feces, homo sapiens, sri lanka, age 1-18 years2020-09-13v3No1 / 16
352amnonhigh freq. in duodenal biopsies (dominant homo sapiens, small intestine, duodenum, new delhi, india)2018-07-30v4No1 / 17
570amnon high in control compared to visceral leishmaniasis in feces homo sapiens india bihar state 2019-12-16v3No1 / 17
477amnondominant feces, homo sapiens, adult, nepal, himalayas, forager, rural community, chepang2019-01-28v4No1 / 18
339amnondominant feces, homo sapiens, adult, india2018-05-24v4No1 / 18
121amnondominant feces, homo sapiens, adult, bangladesh2017-04-13v4No1 / 19
477amnonhigher in agrarian tharu population compared to foraging chepang population ( high in tharu agrarian compared to forager chepang in feces homo sapiens adult nepal himalayas rural community )2019-01-28v4No1 / 19
339amnoncommon feces, homo sapiens, infant, age < 1 year, india2018-05-24v4No1 / 19
477amnondominant feces, homo sapiens, nepal, himalayas, rural community, raute2019-01-29v4No1 / 19
45amnonhigh freq. in feces babies <2 years in india (dominant feces, homo sapiens, infant, india)2016-12-19v4No1 / 20
477amnondominant feces, homo sapiens, raji, nepal, himalayas, rural community2019-01-29v4No1 / 20
197amnondominant feces, homo sapiens, juvenile organism, obsolete_juvenile stage, age 13, india2017-09-12v4No1 / 23
745amnondominant feces, homo sapiens, united states of america, adult, midwest region2021-02-25v3No1 / 24
745amnon high in age 50-80 years compared to age 25-50 years in feces homo sapiens united states of america adult midwest region 2021-02-25v3No1 / 24
45amnoncommon in feces babies age 0-2 in india (common feces, homo sapiens, infant, india)2016-12-19v4No1 / 31
745amnon high in age 25-50 years compared to age 50-80 years in feces homo sapiens united states of america adult midwest region 2021-02-25v3No1 / 32
352amnoncommon feces, homo sapiens, new delhi, india2018-07-30v4No1 / 41
570amnoncommon feces, homo sapiens, india, bihar state2019-12-16v3No1 / 46
121amnoncommon feces, homo sapiens, adult, bangladesh2017-04-13v4No1 / 50
339amnon high in infant age < 1 year compared to adult in feces homo sapiens india 2018-05-24v4No1 / 50
745amnoncommon feces, homo sapiens, united states of america, adult, midwest region2021-02-25v3No1 / 55
45amnonhigher in younf babies compared to 2 year olds in india ( high in age age 0-1 compared to age 1-2 in feces homo sapiens infant india )2016-12-19v4No1 / 56
656amnoncommon feces, homo sapiens, sri lanka, age 1-18 years2020-09-13v3No1 / 71
477amnonlower in agrarian tharu population compared to foraging chepang population ( high in forager chepang compared to tharu agrarian in feces homo sapiens adult nepal himalayas rural community )2019-01-28v4No1 / 73
477amnoncommon feces, homo sapiens, adult, nepal, himalayas, rural community, tharu, agrarian2019-01-28v4No1 / 74
477amnoncommon feces, homo sapiens, nepal, himalayas, rural community, raute2019-01-29v4No1 / 76
534amnoncommon river, tributary, water, fresh water, nepal, free floating, depth 10 cm, filtered 0.2um, koshi river2019-07-22v4No1 / 80
339amnoncommon feces, homo sapiens, adult, india2018-05-24v4No1 / 81
477amnoncommon feces, homo sapiens, raji, nepal, himalayas, rural community2019-01-29v4No1 / 88
477amnoncommon feces, homo sapiens, adult, nepal, himalayas, forager, rural community, chepang2019-01-28v4No1 / 97
477amnon high in nepal himalayas rural community compared to united states of america in feces homo sapiens adult 2019-01-28v4No1 / 111
352amnoncommon in duodenal biopsies (common homo sapiens, small intestine, duodenum, new delhi, india)2018-07-30v4No1 / 121
197amnon high in finland compared to india in feces homo sapiens juvenile organism obsolete_juvenile stage age 13 2017-09-12v4No1 / 138
121amnonhigh in diarrhea compared to recovery period ( high in diarrhea compared to control in feces homo sapiens adult bangladesh )2017-04-13v4No1 / 162
197amnoncommon feces, homo sapiens, juvenile organism, obsolete_juvenile stage, age 13, india2017-09-12v4No1 / 170
534amnoncommon river, water, fresh water, nepal, free floating, depth 10 cm, filtered 0.2um, koshi river2019-07-22v4No1 / 172
197amnon high in india compared to finland in feces homo sapiens juvenile organism obsolete_juvenile stage age 13 2017-09-12v4No1 / 189
352amnon high in feces compared to small intestine duodenum in homo sapiens new delhi india 2018-07-30v4No1 / 190
534amnoncommon river, tributary, water, fresh water, nepal, depth 10 cm, filtered 2.7um, particle bound, koshi river2019-07-22v4No1 / 193
45amnonlower in young babies compared to 2 year olds in india ( high in age age 1-2 compared to age 0-1 in feces homo sapiens infant india )2016-12-19v4No1 / 253
121amnonlow in diarrhea compared to recovery period ( high in control compared to diarrhea in feces homo sapiens adult bangladesh )2017-04-13v4No1 / 263
477amnon high in united states of america compared to nepal himalayas rural community in feces homo sapiens adult 2019-01-28v4No1 / 295
534amnoncommon river, water, fresh water, nepal, depth 10 cm, filtered 2.7um, particle bound, koshi river2019-07-22v4No1 / 315
339amnon high in adult compared to infant age < 1 year in feces homo sapiens india 2018-05-24v4No1 / 457
352amnon high in small intestine duodenum compared to feces in homo sapiens new delhi india 2018-07-30v4No1 / 545

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